Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40603 |
Symbol | |
ID | 7198381 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 405914 |
End bp | 406743 |
Gene Length | 830 bp |
Protein Length | 240 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184613 |
Protein GI | 219128843 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.817133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGGAAA CCCAGCTGAT TAAAAGATCC AACAGACGAT CTTTTTTCAA AGTTGGTGGA CTGCATCTTG GCATGCACGG GTTGCTAGGT TTTTCTTCAT TATCTCTGAC CATCCTCGCA TACTACAGCT ATCCAAGCGA ATACCCAATA TGGATTGGAT TGTCGCAAGT TGCAAATCTA GTAACGGTTA CCCATGCCCG AAATCTTCTC TCTCAAGTGC CGGCATCCAC ACAAATTTTT CCTGGTATAG TTGCCCCGCA CAGGGAAGCA TTCCAACGGA CAATCAGCGG AATGCAATAC CTCGTCACAC GTGTCACATG TCTGGCCTTT CGGGACCATT CCATGGATAT TGGATTCCGT AGTACCTTGG CACTCTTACT GTGGCGTGCT TGGCCTTTAA TTCCTTCGTA CCAAGCTGAG TGGCTCAATG GCAATACGTG GATTTTTGTT ATTCCAATGG CCCTCGGTGT CGCAGGAGAT TTGATCCAGT TCTGGAACGG TGACGTCTTT TCGTCGCGGC AAATTCTGTC AATTCAATTG CATGGGTTGC TTATGGCCTT TGGCTTCACA CTGGGTTTTC GAAACTATTT ACCCATGCCA CTTGGTAAGG TCGTTTGTTT TGTATGATCG AAAAGCATCA ACATCCTGTT ATGTTTGAAA GATAAGACCA ATCGCGTTCT GACTTTTTGT TGCGATTGTT GTTTTATACA GTTTATATGG GAGCTGCGTT CGGTGTGTGG AAGATCCTGC GTGAGGGAAT AATGACCTTT GAAAACGCGT CGCGCGAACG GCTCGCATCC CGGATGGAAC TGTATGCACT CCCGGAGTAA
|
Protein sequence | MGETQLIKRS NRRSFFKVGG LHLGMHGLLG FSSLSLTILA YYSYPSEYPI WIGLSQVANL VTVTHARNLL SQVPASTQIF PGIVAPHREA FQRTISGMQY LVTRVTCLAF RDHSMDIGFR STLALLLWRA WPLIPSYQAE WLNGNTWIFV IPMALGVAGD LIQFWNGDVF SSRQILSIQL HGLLMAFGFT LGFRNYLPMP LVYMGAAFGV WKILREGIMT FENASRERLA SRMELYALPE
|
| |