Gene PHATRDRAFT_40603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40603 
Symbol 
ID7198381 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp405914 
End bp406743 
Gene Length830 bp 
Protein Length240 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184613 
Protein GI219128843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.817133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGAAA CCCAGCTGAT TAAAAGATCC AACAGACGAT CTTTTTTCAA AGTTGGTGGA 
CTGCATCTTG GCATGCACGG GTTGCTAGGT TTTTCTTCAT TATCTCTGAC CATCCTCGCA
TACTACAGCT ATCCAAGCGA ATACCCAATA TGGATTGGAT TGTCGCAAGT TGCAAATCTA
GTAACGGTTA CCCATGCCCG AAATCTTCTC TCTCAAGTGC CGGCATCCAC ACAAATTTTT
CCTGGTATAG TTGCCCCGCA CAGGGAAGCA TTCCAACGGA CAATCAGCGG AATGCAATAC
CTCGTCACAC GTGTCACATG TCTGGCCTTT CGGGACCATT CCATGGATAT TGGATTCCGT
AGTACCTTGG CACTCTTACT GTGGCGTGCT TGGCCTTTAA TTCCTTCGTA CCAAGCTGAG
TGGCTCAATG GCAATACGTG GATTTTTGTT ATTCCAATGG CCCTCGGTGT CGCAGGAGAT
TTGATCCAGT TCTGGAACGG TGACGTCTTT TCGTCGCGGC AAATTCTGTC AATTCAATTG
CATGGGTTGC TTATGGCCTT TGGCTTCACA CTGGGTTTTC GAAACTATTT ACCCATGCCA
CTTGGTAAGG TCGTTTGTTT TGTATGATCG AAAAGCATCA ACATCCTGTT ATGTTTGAAA
GATAAGACCA ATCGCGTTCT GACTTTTTGT TGCGATTGTT GTTTTATACA GTTTATATGG
GAGCTGCGTT CGGTGTGTGG AAGATCCTGC GTGAGGGAAT AATGACCTTT GAAAACGCGT
CGCGCGAACG GCTCGCATCC CGGATGGAAC TGTATGCACT CCCGGAGTAA
 
Protein sequence
MGETQLIKRS NRRSFFKVGG LHLGMHGLLG FSSLSLTILA YYSYPSEYPI WIGLSQVANL 
VTVTHARNLL SQVPASTQIF PGIVAPHREA FQRTISGMQY LVTRVTCLAF RDHSMDIGFR
STLALLLWRA WPLIPSYQAE WLNGNTWIFV IPMALGVAGD LIQFWNGDVF SSRQILSIQL
HGLLMAFGFT LGFRNYLPMP LVYMGAAFGV WKILREGIMT FENASRERLA SRMELYALPE