Gene PHATRDRAFT_40368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40368 
Symbol 
ID7198283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp223961 
End bp224449 
Gene Length489 bp 
Protein Length162 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184324 
Protein GI219128237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCATC GACGACAAAG ACTCTGCATC CCAAGGATTT TCTTCCTGGT TTTCGTCGTC 
GCTTTCGCAC ACGGATTTGT ACCGCTATCC ACCAACCAAA AATGTCGCAC GTTGTTAAAC
CTCGTGACGG AAGACGACGT GATTCAAAAG GTTGAAGAAG CGGAGGCTCT GTGGACCAAG
GCGCACGATG CCCGCGAAAG GGCCAACGCG TTGTCCGATC AGGCTTCCGA AGAAGCTGAA
GCGGCATCGG GAAAAGCTAT TGAGGTGGAG CGAAAGATGA AAGAAGGATC CGTTTCGATG
GAAAAGCTAC AGGAGGCGGA CGCAGCGACT ATGGCCAATA TCGAAGCCAA CTCGATGGTC
AGTAAAGCGC TTCAGGCCGC TGAGGAAGCT GATTTACTTG AGGAGATGGC TGAACAAGCT
TTGCAAGAAT CCGAAAAGGC TTTGACTCAG CATCTCAAAG ACTTTCCAGA TTCGCAGTTC
GCCGAGTAG
 
Protein sequence
MVHRRQRLCI PRIFFLVFVV AFAHGFVPLS TNQKCRTLLN LVTEDDVIQK VEEAEALWTK 
AHDARERANA LSDQASEEAE AASGKAIEVE RKMKEGSVSM EKLQEADAAT MANIEANSMV
SKALQAAEEA DLLEEMAEQA LQESEKALTQ HLKDFPDSQF AE