Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40048 |
Symbol | |
ID | 7195760 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | + |
Start bp | 23083 |
End bp | 23856 |
Gene Length | 774 bp |
Protein Length | 225 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184049 |
Protein GI | 219127660 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00311694 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG CTGCATTTCT TCTCGGACTT GTATCGCTTA GCGCTGCCTT TACCCCGCAG CCCCGGATTT CATTGGGTGC CAGAGCCGTT TGTGGTACAA CCTTATACGC TGCCGTCGCC TCCGTAAAGG ATGTTACCGA CGATGCGTCG GATCGCATGG CGAAATCGGT CGATTCGGTC CGCTTGAACC TACAATCGGT CCGTACGGGT CGAGCCTCGG CCCAAATTTT GGATCGCGTC AAGGTGGATT ACTACGGCGT CGAAACGCCG CTTAACCAAA TGGCCACGAT CAGTGTTCCA TCTGCCCAGC AACTGTCCAT TGATCCTTAC GATAAAACTT CTTTGAACAA TATTGAGACT GCTATTGTGG AATCAGACTT GGGATTGACT ACAAACAACG ATGGATCCAT CATCCGCATC AACATTCCTT CCATGACAGA AGATCGGCGT AAGGAGATGC TAAAGCTCTG CAAGTCCATT GGGGAAGAAG GAAAGGTTGC GGTTCGGAAT ATTCGACGGG ATGGTCTAGA CACCATCAAA AAAATGGAGA AAAGCAGTGA TATTGGTACG TGCCGAATAA TGCAATTGAA CGGCCGCGCT CACACTGTCT CGTTTCTGAT CTAACGATTT GCTATTCGGA ATCCTCTGGT TCCATTCGTA GGCGAGGACG AAATGAAGGA TGGTCAAGAC ACCATGCAAA AGCTCACCGA TAAGAATGTC AAAGAAATTG ATGAAGTTGT CGGTGCTAAA GAGAAGGAAG TCATGAAGGT TTAG
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Protein sequence | MKSAAFLLGL VSLSAAFTPQ PRISLGARAV CGTTLYAAVA SVKDVTDDAS DRMAKSVDSV RLNLQSVRTG RASAQILDRV KVDYYGVETP LNQMATISVP SAQQLSIDPY DKTSLNNIET AIVESDLGLT TNNDGSIIRI NIPSMTEDRR KEMLKLCKSI GEEGKVAVRN IRRDGLDTIK KMEKSSDIGE DEMKDGQDTM QKLTDKNVKE IDEVVGAKEK EVMKV
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