Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_4003 |
Symbol | |
ID | 7199822 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 613224 |
End bp | 615086 |
Gene Length | 1863 bp |
Protein Length | 255 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178812 |
Protein GI | 219116034 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACCCGATCG CCAAAGGTAG TTTTGGCCAG GTCTACGTCG CCTGCCACCA ACTCAACGTT TTGGAAGAGT ATGCCGTTAA AGTCGTCGAC CGCGTCAGTC TTTCACAGAG AGACAACGAC GCCGTCTTCC GTGAGGTAGC GATTCTCAAA GACTGCCGCG ATGTAACAAA CATTGTCCGC CTCGTCGACT TTTTCGTATC TCCCCGGCAC TTTCATGTCG TACAAGTCTT GGCCCAAGGT GGTGACGTCT TTGATCGACT CGCGAGTAAA ACTTCCTACA ACGAAAAGCA TGCTCGCGAT CTCGCTCATA ATTTGCTCGT ATGTATGCAA GCCTTGCACG ATCGGGGCTT GGCGCACCGC GACCTTAAGC CAGAAAATCT TTTGCTGCGA GATTTGATTG ACGATGCCAG CATTCTTGTG GCGGATTTCG GGTTCGCAAC GTACGTACCA GCGGACGGAT TGAAAACGCG TTGTGGTACC CCAGCCTTTG TGGCTCCCGA AGTGTTAGTA GCGGATTGCC GCTACGATTC CCAAGTTGAC ATGTGGAGTG TGGGGTGTTT ACTTTACATG TTGTTGGGGG GATATCCACC GTTTCAGGAC CGAAATCATC GGGGATTGTT TCGAAAAATC AGGGGTGCGG ATTTTTGCTT TCACGAAGCC TACTGGAAGG ATGTTTCCGT CGAAGCAAAG CAGCTTTTGG CAGGACTTCT TACAACAAAT CCGAAGTTTC GACTAACGGC AACCCAGGCG TTGGATAGCA AGTGGCTCAA AGTCAAGGAC CATCGTTTGG AAAATATAGA CCTCTCTAGT TCGATTCGAG AGCTAAAACG CTTCCAGGCT CGAATCCATT TGAAAGGTGC GATGCACGCC GTTTTATGGA GCGTCAAAAA GAAATTCCGA ATTTCTAGCG AAGGCTTTTC CAAGCAAATC AGAGACTGGG ATCAAAGCGA CGAGGCAAAT AGCACAGATA ACGCGAGCAA AAAGGATGAC GACGATGACA AGGATCAGGC CGCGGCTTTG AAAAAGAATC CTATGGGGAT AGAACTTCGT CCAACAATGC AGTTTCGTGA TGTCTACGAG CTAACCGACA AGATTCACGC ATCGCAACAA GCCATGATTT GGGAATGCAA GCATATTCAT ACGGGAAAAA TTTATGCGGC AAAAGTCTGG AATATTGCGG CAAACCAACA GTCCGTCTTG GGTAAATCTT TGACGGAGAC AGTTCTACAT GAAGTTGCGG TCTTGAGAGC CATCAAGCAC AAATATTTGA TGGAAATTGT CGATTTTTTT GAAGAGGGCA CTCACTTGTA TCTAGTGATG GAGCGTATGG CTGGCGGTGA CGTCTTTGAT CGCATTCTCA AACGGAAGCA CTACACGGAA AAAGATGCCA GAGATTTTGC TCGTATTTTG CTAGAAGGCG TAGCGCATAT TCACGAACAA GGTATTGCCC ATCGCGATCT CAAACCTCAA AATTTGTTAC TCTCCTCCAC GGATGATGAT GCGGACATCA AGATTGCCGA TTTTGGGTTT GCGTGTCGAG TCCATACCCC TATGTCTTTG ACGACGCGTT GCGGGACACC AAGCTACGTG GCACCTGAAA TTCTGAAGAA CATTCCTTAC GATCAAAGAG CTGATATGTG GAGCGTAGGA GTTATTTTGT TTGTATTGCT AGCGGGTTAT CCTCCCTTTG TGGAAGAAAA CCAATTGGAA TTGTTTGCTC GTGTCCGATC CGGTGAATGG GATTTTGCTG GCAAAGAATG GGAAAACGTG TCCCCAGAAT CCAAGGAAGT CATCAGCCAT TTGTTGGTGA TCGACCCTGT ATGCCGTTGG ACGGCACAGC AATGCCTACA GAGTGATTGG TTG
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Protein sequence | DPIAKGSFGQ VYVACHQLNV LEEYAVKVVD RSVLGKSLTE TVLHEVAVLR AIKHKYLMEI VDFFEEGTHL YLVMERMAGG DVFDRILKRK HYTEKDARDF ARILLEGVAH IHEQGIAHRD LKPQNLLLSS TDDDADIKIA DFGFACRVHT PMSLTTRCGT PSYVAPEILK NIPYDQRADM WSVGVILFVL LAGYPPFVEE NQLELFARVR SGEWDFAGKE WENVSPESKE VISHLLVIDP VCRWTAQQCL QSDWL
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