Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40017 |
Symbol | TYR1 |
ID | 7195493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 605879 |
End bp | 607519 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | tyrosinase |
Protein accession | XP_002184029 |
Protein GI | 219127618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.645981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCTCAA TGCTTCTCGT ACTCTTCCTT GAATGCCATT CGACGACTGG TAGGACAATG GCTGCAACAA CAAGAAAGGA AAGTGCACAA ACCAACGATA CCGTGCGACC ATTGGGCGCC AACGCATTTT GTAAAAACGG GGAAAAGACA AGGATTCGAC GTGACTGGGA CTTGATCTCT CGTGACGACC AGGACCTCTA CATCGAGGCG ATCGAAGAAG CAATAGATCG AGAATTATAC CAGGCTTTCT TGGGCTACCA TGCGGACTCT GTAGCGTTAG TACAATCGCA CGAAACATGT GGTTTCGCAT TGTGGCATCG AACCTTTCTG TTAGCTTTCG AAAACATGTT GCGGTCGCTG GCACCACGGT TTGCTTGTCT CACTATCCCT TATTGGAATG TGATGGAGCA TTCTAGTGAT CAAGCCAGAG GCTTGTGCAC CAGCTATCGA ACCTGCTCCA GAATAGTAGG AGACCTTGGT GGTAGTCCTG TCGCGGCAGC AGCGACCCGT CTGTATGCCG GCATTGAGGC TACTGGAGAT TTGATTACCG GTCGTCCAAT TCGCAATCTC CATGATGACA ACAACGCTAC TGGCATAGTG CGCGATGACT TATTCTGGGT CACTCTGCCT GCGAGTACAG CGTACGATAG CGTTCTCGAT ATCCTGGTTA CTAGTCCGTC CTACGTTCAA TACACACGTC GGATCCAGGA AACCATTCAC GACGATGTTC ACGACACGTT GGGTGGCTTC ATGCCCACAT ACTCAAGCCC CACTGATCCA CTCTTTATGC CGTGGCACAG CTTTATCGAT CTTGCTTTGT TCATGTGGGA AGCTTGCTAC TTGGATCCAT CGGAACAAGC TTCCGGTACG CGTCTTGCTG CAGACTGGGC GTTTGAGGGC GCCGGATCGA ACTGCTCCCG AAGTGGTCGC AGTAAGGTCC TGTTCCCCAT CCTCAACGCC ACGAGCGAGC TATATCTTAT GAGGGGTGAC TTTCATGTGC TTGAAGATCC CTTGATTGGA ATCTATTTTG CCGATATTGG AATTCTTTTC TCGGATGTGG CGTCTATTCG TGACTTGGGA GAGGACTTTG ATTTCACCTA CGATCACGTG ACGGAGCGGA TTTGGAATGT CCTGCAAGAT CCGTCTCAAT GTCCGTCCTC GGGATCCTGG ACAGCCTTTC CGACTCCGTC GCCGACAACG GCATCCCCCG TGGTAGGATC ACCAAACGAT GCCGATGCTC GTAGCGAATG GCTGGCTGGG ATCCGTCAGC GCCTCGAGGA AATGTTTGCC GAAACACACC CGGGATACGT TGCCCAATAC ATGTCTTACT TCACCTGTGT CACGCAGGAT GAGACAAGTC TCTCTGTATA CACAGAGGAT CCGGGCGAGT ACTTGGTTGA TGTGTTGAAT GGCAACGCGA TTATTAGAGC GCGTTGCGCC TTTTTCCTTC CCGAAACAGA GTCCGTTACG AATGAGGAAT TGCCCACGTC TTCGACTCCT GTGGCTGCGC CCTCTGAGAA CAGGGACCAG TTTGCAGGCG ACGACGAGGA TGATGACCAG ACTAGTACCG CCCTAAGAGC ACCTCAACCG TACTTTGGCA TTGGGTTGGT CAGCTGCTTG GTGCTACTCG TTGTGGACTA G
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Protein sequence | MCSMLLVLFL ECHSTTGRTM AATTRKESAQ TNDTVRPLGA NAFCKNGEKT RIRRDWDLIS RDDQDLYIEA IEEAIDRELY QAFLGYHADS VALVQSHETC GFALWHRTFL LAFENMLRSL APRFACLTIP YWNVMEHSSD QARGLCTSYR TCSRIVGDLG GSPVAAAATR LYAGIEATGD LITGRPIRNL HDDNNATGIV RDDLFWVTLP ASTAYDSVLD ILVTSPSYVQ YTRRIQETIH DDVHDTLGGF MPTYSSPTDP LFMPWHSFID LALFMWEACY LDPSEQASGT RLAADWAFEG AGSNCSRSGR SKVLFPILNA TSELYLMRGD FHVLEDPLIG IYFADIGILF SDVASIRDLG EDFDFTYDHV TERIWNVLQD PSQCPSSGSW TAFPTPSPTT ASPVVGSPND ADARSEWLAG IRQRLEEMFA ETHPGYVAQY MSYFTCVTQD ETSLSVYTED PGEYLVDVLN GNAIIRARCA FFLPETESVT NEELPTSSTP VAAPSENRDQ FAGDDEDDDQ TSTALRAPQP YFGIGLVSCL VLLVVD
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