Gene PHATRDRAFT_39908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39908 
Symbol 
ID7195537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp339192 
End bp339776 
Gene Length585 bp 
Protein Length194 aa 
Translation table 
GC content43% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183972 
Protein GI219127500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA CTCCTCCTAA GATGCCGCTG CCAGAAGTTC GTCGAGCTGC TGTGCAGCAT 
GAGATCCGAA TTGTGGAAGC TCGTCAAGAA CTGCAGCGAT CGAACAGTAA AAAAGAGCTC
ATCAACGCTT TCAAAGCTGA AATGCTTCAA AAGGTAGAAG ATTATATGAC CGACATTAGC
AAGCTGGAAC GCAAGAAATG CGATTTGAAA ATGTATAAAG ACGAGCTTTT GATAAAGGTA
GAAGATCACA TGAGCGATCT GAGCAATCTT GACAAGAAAA AGGCCGAACT GGCATCATTC
AAGGGTGAAA TGCTCGACAA AGTCGATCAG CACATGAGAG AACTCGAGCG TATGCAAACG
AAGAATGCTG ATCTCGTTAC ATTCAAAGAC GAATTATTGA CGAAAGTGGA AAATCATTTG
AAAGTTTTGA AGCTTTCGCA AGATAAGGCC GCTGATGTGG CGAGGTTCAA AACGGAGATG
CTTCAAAAGG TTGAGAAGCA CTCGCGCATG ACGGAGCTCA TGGCCGAAAA ACATATGCTC
CTCAAAGATG TACTTTCAAA AAAAGTGGAA GCGTTTAAGC AGTAA
 
Protein sequence
MSATPPKMPL PEVRRAAVQH EIRIVEARQE LQRSNSKKEL INAFKAEMLQ KVEDYMTDIS 
KLERKKCDLK MYKDELLIKV EDHMSDLSNL DKKKAELASF KGEMLDKVDQ HMRELERMQT
KNADLVTFKD ELLTKVENHL KVLKLSQDKA ADVARFKTEM LQKVEKHSRM TELMAEKHML
LKDVLSKKVE AFKQ