Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39777 |
Symbol | |
ID | 7195636 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 4276 |
End bp | 5483 |
Gene Length | 1208 bp |
Protein Length | 392 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183791 |
Protein GI | 219127123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.837678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAG GGGATTCCCG CCGAAAGATT GGTGCTCAGG TCACAGCGAA GGCCTGTCAT GTCGTCCATT TGAGTGAGTG TGCTCGGCAA TATGGTGCTT TGAGGACCAC CAAGGTGGTT GTAGGGACTG TTGTGGACGT CAGCAATACC AAAAAGCCGC CAAACAACCG TGTATCAACC TTCAATACTG CTGACTTTGA TATTAGTGGA GGATCAGTCA AGCGGAGCAC TCTGAACATC CGTAGTGTCA AACTTTTCAA ACCGGAGCAG TCGACAGTAC CAGCCAGTCC CGCAGCAAAA TACCGGCAGT AGATAACATA GACACAGATT TGGCCGTTCC AGAGCAAGAG GAAGGAGAAG CGGTCTTGCA GGAGACTTCT CCTGATGAAG AATTGGAATT TCCAGCACAA CCGATGGTGA AAATTGGAAT AGCTGCGGGG GAACAGGTAG CAGGACCTAC TGCACAAGTA GCCACGCAGG TTTGGGATAT TGAAGACGCT TCCTTTGTCA TGGCTCATGA AACAAAGTGC TATGCTGACA AGCAAGCTAC ATTGATTGAT ATAAATGGCA GTATCCAAAG TAAGCAGTTT GGCATCAATA CACCAATTGG CGACCTTCTT GGTCCAGACT CTGACATTGA TGGAAGATAT TCGCAGCTGC AATATTTTCT TCTCATGTTT CCACCCGACC AACTGACCGC CATGTGTCAG CTAACAAATG TGCAGCTTGC CCAACAGAAC AAGCACCGCA TGTCAACAGG AGAGCTGCTT CAATTCTTTG GCATTCTAAT TCTTGCGACA AAATTTGAAT TTAGCAGTCG ATCGCAATTG TGGTCCACAA CCACGCCGTC AAAATACATT CCTGCCCCTG TATTCGGAAA AACAGGAATG TCGCGGCAGC GCTTTGATGA TCTTTGGCAA AATATCCGAT GGAGCAACCA GTGTCCTGAA CAGCCGGAAG GTATGAGCTC CCATATGTTT TGGTGGCAAC TTGTTGATGA TTTTGTTGAA AGATACAACA ATCATTGTGC CAACACTTTC AAACCATCTC ATCTTATTTG TGTGGATGAA TCAATGTCGC AATGGTATGG ACAAGGGGAG GAATGGATAA ATCATGGACT CCCCAATTAC GTGGCTATTG ACCAAAAGTC CGAAAATGGT TGTGAGATTC AAAATGCCGC ATGCGGCTGT TTGGGTATCA TGCTTTGA
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Protein sequence | MSEGDSRRKI GAQVTAKACH VVHLSECARQ YGALRTTKVV VGTVVDVSNT KKPPNNRVST FNTADFDISG GSCQTFQTGA VDSTSQSRSK IPAVDNIDTD LAVPEQEEGE AVLQETSPDE ELEFPAQPMV KIGIAAGEQV AGPTAQVATQ VWDIEDASFV MAHETKCYAD KQATLIDING SIQSKQFGIN TPIGDLLGPD SDIDGRYSQL QYFLLMFPPD QLTAMCQLTN VQLAQQNKHR MSTGELLQFF GILILATKFE FSSRSQLWST TTPSKYIPAP VFGKTGMSRQ RFDDLWQNIR WSNQCPEQPE GMSSHMFWWQ LVDDFVERYN NHCANTFKPS HLICVDESMS QWYGQGEEWI NHGLPNYVAI DQKSENGCEI QNAACGCLGI ML
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