Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39741 |
Symbol | |
ID | 7195453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | + |
Start bp | 590620 |
End bp | 591522 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183639 |
Protein GI | 219126804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000809401 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAA TTGAGAAGTC AGCAAAATCT CATGATCTGA ACGCTTTGGA TCATATGACA AGCAAGAAAA AGGCGGAAGA AGATTTTTGC GGGGACAAGC GCCAAGCCAT TTTGAGTCCT AACGAAAGTG TTGCAAGCGA GGAAGAAAAT AAACTAGCCA AAAAGCGAGC CTACAACAGA AAAAATGCGG CTCGGGCACG GCAAAGAGCT AAGGACCAGT TGTCTGAACT CAGCCAGAAA CTTGACGCTC ATTGCCACGA GAACAACCAG CGAAGGGTGC GGAACGAGGA ACTTGTTTCC CAAATCCAGA TCTTGCAGGA AGAGAACCTA AAGCTAAAGC AACTCTTGGC AGCATCCTCC ACGTGCAGTG CGTGTAATAT GAAAACGTCT CTTCCGCCTC CCGTAAATCT CACTTCGAGG AAGCGGCTTC ATCAACAGGC TTTCCTTCCA TCGGCTCCTC AAAGTGATTC AAACTTTGCA TTTCACCTCC TTTCTTTGAC AAACCGATAC CAGCCTGTCA GCAATCTACA AAACAACGAC CTCCATAAGG GAGATCTCTT CCGAGGAAAT TCTGAGCAGC AGAGTACTGA CTCGTCGCTG GCAGCACGAC AACAGCAGCT ACGAGGTAAA GATGGACCAA CTGCTTTAAT CGATGGGAAT CAACTTCTTG CGGGCACGCC CCAACAGAAT CAGTTTGGCT TTGAGCGTTC TTTGCACAAC CTTCAACTCA CTCATATGCA CCAGCTGTTG ACTGAGTCGG AGCAACGGCG CTCGTTTCTT GACGTTTCCG TGGATCCAGA TGGAGGCCAG ATACGACGAG GCATAGAAGA GAGAGAGAAA AGATCCTTGG TACTTTCTTT GCTAAAAATG AACGCCGCGA AACAACGGAT TGGCGAACGG TAG
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Protein sequence | MTAIEKSAKS HDLNALDHMT SKKKAEEDFC GDKRQAILSP NESVASEEEN KLAKKRAYNR KNAARARQRA KDQLSELSQK LDAHCHENNQ RRVRNEELVS QIQILQEENL KLKQLLAASS TCSACNMKTS LPPPVNLTSR KRLHQQAFLP SAPQSDSNFA FHLLSLTNRY QPVSNLQNND LHKGDLFRGN SEQQSTDSSL AARQQQLRGK DGPTALIDGN QLLAGTPQQN QFGFERSLHN LQLTHMHQLL TESEQRRSFL DVSVDPDGGQ IRRGIEEREK RSLVLSLLKM NAAKQRIGER
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