Gene PHATRDRAFT_39335 details

Gene Information

• Locus tag: PHATRDRAFT_39335
• ID: 7195056
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: -
• Start bp: 233343
• End bp: 233957
• Gene Length: 615 bp
• Protein Length: 204 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002183446
• Protein GI: 219126400

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.102329
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGAAA CAAACAACAA TGCGGGTCCG AACATTAGCT ATATCCAGGT ACCTTCCATT 
GACAACAATA ACGCATACAA TATGCAACGG AACAATATGA TGGCAGCAAC TCCAACACAA 
CCGGGAATGC TCTCTCAGCA GGCTCCGGCA CCTCCGAATG GCGCTCCAAC AAACATGGCA 
GCCTTTATGC AGCAATCCGG AGCCGCGCAA ATGTATGCCG CGTTTGCTCA AATGCAACAG 
CAACAACACC ACGGGGGCAT TGCAGGTGGT ATTCCAAACA ACATGGGGAT GGATCCCAAC 
TCTAATCATG CAAATCCTTC GCTAGCAGTC AACGCGCGGC CAACCTTCGT GAACGCCAAG 
CAGTATCGCC GAATTCTGAA ACGTCGGGCG GCTCGAGAAA AGCTAGAGGA GTTTTATCGT 
GTCCGCAAGG CGGCGCAGGA TGCCAAGAAA CCTTACATGC ACGAGTCACG GCACAAGCAC 
GCCATGAAAC GACCTCGGGG GCCGGGGGGA CGATTTCTAA CGAAGGACGA ACTGGAAATA 
TACTACAAAG ACAATCCGGA AAACGGTCCG AAACAAGAGG AGGATGCAAA GCGAGCGAAG 
GTCGGCATCA ACTAG 

 

Protein sequence

MTETNNNAGP NISYIQVPSI DNNNAYNMQR NNMMAATPTQ PGMLSQQAPA PPNGAPTNMA 
AFMQQSGAAQ MYAAFAQMQQ QQHHGGIAGG IPNNMGMDPN SNHANPSLAV NARPTFVNAK 
QYRRILKRRA AREKLEEFYR VRKAAQDAKK PYMHESRHKH AMKRPRGPGG RFLTKDELEI 
YYKDNPENGP KQEEDAKRAK VGIN