Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39265 |
Symbol | |
ID | 7195194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 69234 |
End bp | 70271 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183282 |
Protein GI | 219126058 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.489022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCGGC ACAGCAAGTG TTGGGATGAA CCTTCGGAGC CAATGGACGA AAGCTCCTGT AACGCGTTGC AGGACGCGGA AGACAGCGTA GTCCGCTTGG TGGAAGACCG CAAGTTGGTG CGGCAAGCGA CGTCTCGACA GTCTCAGGCT ACTACTACGT TGGCGGAAAT GGTCTTGTCC TTGTCGTCGG CGTTGCATCA CGTGTGTCCG GACTCTCACG GAAGCGCGCG GGTTGCCCAG GTTGCTCAAG GCGTCGAAAG TCTCAAGCTC CGACAAACCA AAGCCACACG CAAGACGGAA CAACTCGTAC AGAAACTTCA AAGTACAATC AATGCCCAAC AGAACGAACT CGAAATCCTA CGCGCTCGGC AGCAGCAACA ACAACAACAG AAGCATACGT ACCAAAGGAA CGTCCAGGTA CAAGTGTCCC GTTGGCCCCC CGCACACGGT CCGCAAGACG AAAAGACCGG ACGAATGCCG GATGTCGAAA CCTCTACCCA ACGGACCGAG ACGACACACA CGACGTCGTT TGATTCACCG TCGGCGGACT CGCATTCGAC GACGGAGGCC TCTCCCGTTC GCACAGAAAC TTGCCCCACT ACAGATCCGG AATCCGAATC GAGTCCTCTC CTTCCCACAT CACCCGCTCG ATCCCACAAC GACTCCGCCC TGCCAGTGTC AATGCCAGCA CCAGTGCCAA CGGTCCCGAC ACCAACGGCA TCACCCGTGT CGCTTACCGA AGACCCGAAC GATGCCAACA TCCTTCCCGC CCTTCTGGAT ATGCATACAC TCCTTGACCA GCCACCCGAT TCGGACGACA TGAGTGCCTT GACCTTGCAC ACCACCCGCC GTCCCAGTTC CTCTCCCCAC GACCCGTCAC CCTCGAAGCC TCGGCGCAAC AAGGTGCGCC CTACCAAAGC CACTGAAGGG ACGACTCCCC AAGATAACCA TCCCACGAAG ACTACCTCCA CCTCTCGACG CCGTACCAAA ATTCCTGTCG AAATTACTCT TTTACCTCAG GAACGACTGG AGGTCTAA
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Protein sequence | MPRHSKCWDE PSEPMDESSC NALQDAEDSV VRLVEDRKLV RQATSRQSQA TTTLAEMVLS LSSALHHVCP DSHGSARVAQ VAQGVESLKL RQTKATRKTE QLVQKLQSTI NAQQNELEIL RARQQQQQQQ KHTYQRNVQV QVSRWPPAHG PQDEKTGRMP DVETSTQRTE TTHTTSFDSP SADSHSTTEA SPVRTETCPT TDPESESSPL LPTSPARSHN DSALPVSMPA PVPTVPTPTA SPVSLTEDPN DANILPALLD MHTLLDQPPD SDDMSALTLH TTRRPSSSPH DPSPSKPRRN KVRPTKATEG TTPQDNHPTK TTSTSRRRTK IPVEITLLPQ ERLEV
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