Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39247 |
Symbol | |
ID | 7195185 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 22387 |
End bp | 23902 |
Gene Length | 1516 bp |
Protein Length | 430 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183273 |
Protein GI | 219126039 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATAT CGCGAGGACC AAACTTTTGT GTCGCGTTAA CAACTGTACG CCAACGAGCG GTCGTCCAAA CCCGAGCTCG GACAAAAACC AAAATGGCCC TAGACAGTGC CTTGTCGACG CCACAAAGAG TAGCAGTTAT CGGGGGTGGG CTCGCCGGCC TTTCGACCAC TTACCACTTA CTGGAAAAAA TGCCAAGCGG TCGTCATCTC TCGGTAGAAG TCTTCGACAA GGGGTTAGTT GGAACTGCGG GAGCCTCAGC TGTTGCCGGA GGGTAAGTTT TCGGCGAGAG TCAATGTCAA TACTGACTAT TGTCAAAGAG CTTTTTCGTC AATGATTATA GACATATTTG CTACTCCTCA TTGAGTTCTG TACTCATGAC GACACACATA TATCACCAAG ATCGATGAGA CGAAAGGGTC GAAAAGGATT GAGAAAAGAT CAGATTATTT CTTCGCTTGT TCTTTTCTCA CACGACCCCT TTTGTTTCTT GGTAGACTTT TGCATCCTCT CTCGCCTCGC GGAAAATTGG TGCACTTGGG TATGGAAGGA CTCCAAGCAA CAAATTACCT TTTGGACAAG GCGCAGAGAT CTTCGGCGGA CGTTGGGTGC ACCCCCGAAT CGGTCGTTTT GCGCAATGAA CTGTATCGAG TGGCCATGAC TCCAAACAAT GTCAAACAAT TGCAAACTAC GGCCCAAACT TTACCAGAAT TGTGTGAGTG GGTGGATTCT GGTACTGATC TGTCCGGCCT CTTCTCCGAA GGTGACAACA GCGTACTCGG TGCATTGCGT ATGTATAATG GCTGCAAGGT AATCCACCCT CCGTCCTATT TGTCTTCCCT TTGGGCAGCT TGCGAGAGTC TAGCTGACGA AAAGGAGTTA TCGGTGTCGT GGAATATAAT ACATGGTGAT GATGGATTCA CGGAAAGCAC CTTGTCAGCG TGGAAAAATC GCTTGAAGGA CTTTGACGCG GTCGTGGTTT CGGCTGGTTC TGGTATGTTT GGAACCTTTT TGCCACTTGC ATCGCTCCCG ATACAGCTTG TACGGGGACA ATCGCTGGAA ATGCGTATAC CGAGCGACGC ACAATGGTCG AAAAACGCGC TGTTGTGTGG TAAATACGTG TCACCACTAG CAGACAAGGA TACTGTTTTG GTCGGTGCCA CACATGAATT CCAGGAAAAT GCACTTAATG TGAAAGGCGT GCTTGCTGAA TTGAAAATTC GGACGGAAGG AATGGTTCCA AAACTGTGGG AGCAAGGTGT AATTCAACGA ATGACGGTCG GCTACCGAGT GCAGAGCGAA CGCGGCAGGC ATGGTAGGCT TCCGATTGTT GGGCGAATTC CGATGCCTTT CGCGGAAGCT TTACATCGCA ATGCTTGGGT ATTCTCCGGT CTGAGTAGCC GCGGCTTGCT TTACCACGGG ATTTTTGGGG AGGCTCTCGC TGGGGCGGTG CTACAAGGGA ACGAAAGTCT TATACATGTA AGCTATCCAG AACTGGCTTG GTGGCAGAAG TCATGA
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Protein sequence | MTISRGPNFC VALTTVRQRA VVQTRARTKT KMALDSALST PQRVAVIGGG LAGLSTTYHL LEKMPSGRHL SVEVFDKGLV GTAGASAVAG GLLHPLSPRG KLVHLGMEGL QATNYLLDKA QRSSADVGCT PESVVLRNEL YRVAMTPNNV KQLQTTAQTL PELCEWVDSG TDLSGLFSEG DNSVLGALRM YNGCKVIHPP SYLSSLWAAC ESLADEKELS VSWNIIHGDD GFTESTLSAW KNRLKDFDAV VVSAGSGMFG TFLPLASLPI QLVRGQSLEM RIPSDAQWSK NALLCGKYVS PLADKDTVLV GATHEFQENA LNVKGVLAEL KIRTEGMVPK LWEQGVIQRM TVGYRVQSER GRHGRLPIVG RIPMPFAEAL HRNAWVFSGL SSRGLLYHGI FGEALAGAVL QGNESLIHVS YPELAWWQKS
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