Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39232 |
Symbol | |
ID | 7194929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 677733 |
End bp | 678302 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183138 |
Protein GI | 219125754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTTG ACGCCGTCCC TTCCAAAACG ACTACACCAC CTACACAGTG CAAGGTATCG ACCAGCGACG AAGAGGAACA GGTTGAGAAC TTGCACTATT GGGCATCGCA AAGCTTAAAC TTTCATTCTT TCCAGAAAGC GAACTGCGGC CTACCGCAAC ATGCGAATGG CTCTCCTTCA CAATTTGCTA GACACCAGCA ACATCCAAGT ACCGAACGAC TTGACGTGTC ACACGACGAC GCACCACTCG GCCGACGATG TCTCAATATC TCGACGACAG ATCAAGACGC GGACGACGAA ATCAGCTCAT TCTTGACTCT GCACGAACAC CGCTCTACAC CTCCGGAGCG AGATTTGACC TCCCCACCTA CCCTTCAGTC TCATAGTCCA AAGCTGCCGT GGTTTCCACT GGACCTGCGG AGCGAATATG AATACCCAGC ATTGGAACCC CGCTACAGGA GACCAAATCT TCGACCGGTT CGCACCAGTT CGGTCCCGGA CCCTTTCCAA GCACGAAACG ACGGGAGTAA GAATTTCTCG AGCATCGCCC GTCTGCTCGC TCCGATCTAG
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Protein sequence | MTFDAVPSKT TTPPTQCKVS TSDEEEQVEN LHYWASQSLN FHSFQKANCG LPQHANGSPS QFARHQQHPS TERLDVSHDD APLGRRCLNI STTDQDADDE ISSFLTLHEH RSTPPERDLT SPPTLQSHSP KLPWFPLDLR SEYEYPALEP RYRRPNLRPV RTSSVPDPFQ ARNDGSKNFS SIARLLAPI
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