Gene PHATRDRAFT_39222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39222 
Symbol 
ID7194681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp649328 
End bp650077 
Gene Length750 bp 
Protein Length249 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183261 
Protein GI219126011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCTC TTGAACATGT TCTTATGAAC CTTTTGGGAG CAACAACACC AGATTTGTCG 
TACTGTCGGT TCTTTGAAGA GTACGGTATT TTTCAGGCCA GCAAGTTGGC CTCCATCACC
AAAAATCGTC TTGCAACGGT GTCATATGGT GTTTTGACTC CTTCTGTGGG AGATACCCCT
GCCACCATTG TTTGTATGTT TCTTCCGCCT GCCCAGCAGG ATCAGATCCT TAAGATTGTC
AAATGGTTCC TCTCGAAAGG TACCAACGTG ACAAACAAAA CCTGGCTTGA ACTTACCCCT
GAAGTCCTTG AGTATTGGCA ACCAGCCTCT GCTATTGTTA CACCTGCTAC TCCTGTTGGA
TCGGACGCTT GGAGTTCCTT TGTCAAAAGT ACTGCCGCGA AATTTCGGAA GACAATCAAA
AATCATTCCG TTCCGTACCC AAAGTTCAGT GAAGACCGTT TTTGGGTCAC TTGGAAAACA
AATATTTGTA TCAAGCTCTG TATCCATGGC GTCCAGTTTG TTCTTGACCC GGATTATTTG
CCTGAGACCG TCAACAAGAC AGATACATTT GCCGAAATGC AGAACTTTGT TTTTGGCGTG
TTCAACAATA TATTGTTGAC CCCTTGTGCG CGTGAAATCC TCCACAACCA TGTGGATGAA
TTGGATGCTC AGGCTGTCTA CCGCAATCTT GTTGCCTTGT ATGGTAAAGG TATCAAGTAT
CAATGCGCAG ATCACTGCCA CATCCATTGA
 
Protein sequence
MDPLEHVLMN LLGATTPDLS YCRFFEEYGI FQASKLASIT KNRLATVSYG VLTPSVGDTP 
ATIVCMFLPP AQQDQILKIV KWFLSKGTNV TNKTWLELTP EVLEYWQPAS AIVTPATPVG
SDAWSSFVKS TAAKFRKTIK NHSVPYPKFS EDRFWVTWKT NICIKLCIHG VQFVLDPDYL
PETVNKTDTF AEMQNFVFGV FNNILLTPCA REILHNHVDE LDAQAVYRNL VALYGKGIKY
QCADHCHIH