Gene PHATRDRAFT_39081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39081 
Symbol 
ID7194743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp278143 
End bp278574 
Gene Length432 bp 
Protein Length143 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183065 
Protein GI219125602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0515403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATG TTCGGCCTGT CCCCGTCAAC GCTGTGTCGC TTCTCGAGCC GTCAAAAGCA 
CGTTTTCGCG TTTCTATAAA AGATTATGGG AGGAGAATCG AGAAGAAGGT TTTTCAGCGT
ATTCTTCTTC CGTTTCAACA AGCAAATGTG GAAACGGAGC GCTTGCCTGG GGGGCCCGGG
CTTTACCTCG CAGCTTCCGC CAAGCTGGTT CATGCTTTGG GTGGTTTTGT TTCTGTTGAC
AGCGTTGTCG ATGAAGGGAC TGAGTTGACA GTAAATTTTG CTTTTGTTGA CAATTTTGAA
CCAGGTCGAA CTATTGCAAC AGCTTTGAGT GATGCAACGA TTTTTTCGTG GGCTCCGACA
TATGGCAAGC GGACCATGTG CAATGCACGC TCCGACATCA TCACATTACT TTCGTCTGCT
GCAAAGAGCT GA
 
Protein sequence
MSNVRPVPVN AVSLLEPSKA RFRVSIKDYG RRIEKKVFQR ILLPFQQANV ETERLPGGPG 
LYLAASAKLV HALGGFVSVD SVVDEGTELT VNFAFVDNFE PGRTIATALS DATIFSWAPT
YGKRTMCNAR SDIITLLSSA AKS