Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39081 |
Symbol | |
ID | 7194743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 278143 |
End bp | 278574 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183065 |
Protein GI | 219125602 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0515403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAATG TTCGGCCTGT CCCCGTCAAC GCTGTGTCGC TTCTCGAGCC GTCAAAAGCA CGTTTTCGCG TTTCTATAAA AGATTATGGG AGGAGAATCG AGAAGAAGGT TTTTCAGCGT ATTCTTCTTC CGTTTCAACA AGCAAATGTG GAAACGGAGC GCTTGCCTGG GGGGCCCGGG CTTTACCTCG CAGCTTCCGC CAAGCTGGTT CATGCTTTGG GTGGTTTTGT TTCTGTTGAC AGCGTTGTCG ATGAAGGGAC TGAGTTGACA GTAAATTTTG CTTTTGTTGA CAATTTTGAA CCAGGTCGAA CTATTGCAAC AGCTTTGAGT GATGCAACGA TTTTTTCGTG GGCTCCGACA TATGGCAAGC GGACCATGTG CAATGCACGC TCCGACATCA TCACATTACT TTCGTCTGCT GCAAAGAGCT GA
|
Protein sequence | MSNVRPVPVN AVSLLEPSKA RFRVSIKDYG RRIEKKVFQR ILLPFQQANV ETERLPGGPG LYLAASAKLV HALGGFVSVD SVVDEGTELT VNFAFVDNFE PGRTIATALS DATIFSWAPT YGKRTMCNAR SDIITLLSSA AKS
|
| |