Gene PHATRDRAFT_38545 details

Gene Information

• Locus tag: PHATRDRAFT_38545
• ID: 7203494
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 357818
• End bp: 359846
• Gene Length: 2029 bp
• Protein Length: 592 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002182669
• Protein GI: 219124770

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGGAG GTCCCGTGGT CGCCCTGGAT CGGATCTTGC ACGGTACGTG TCGACGTTAA 
TGTGGACTGT CAGTTTCGAA CGTTTCCAAA AATCAATCGT TGACAGTGAA CGGTTGCCTT 
TGGTGCCCTA TCAATCGGAG ACTCTGTATT ACGCGCCGTC GCGATTCTAT TCTGTGACGA 
GACTCAGTGA TAAACATTAC TTTCACACTC GCATCCTAAC CCTGCTCTCC CCGCTTGCTA 
CCGTTCTCTG GTGTGCTTTG AAACATTGGG ACGGAACGGG GTTTGCTCCA CAGACTTGGC 
GCACGCATTG ACGGTTTCCG AACGATGGCG AGCGCTGAGA CGATTCCGAG AGATACTGGA 
ACAGGATTTG AAACAGTCCA CGCATCAACA GTGTCGGGAA CGTGAGGTGG ATGTACTGCT 
CGTCTGGAAT GTTCAACTCG CACTCCAAAC GTCCGATCCC ACACTGTTAC CCGACTTGCT 
AGAATGTCTG CGTTCCCTCT GGGCGCACCC ACCACAACGT CACCAGCACC ACAACCACCA 
CCACCACGCA CGATATACCC AACCGGATCC GGAACTGGAG TCGTTGAGTC GTTTCCGTAA 
CAAGGTGGCT CCCGTAGCCG ATGCTAATGG TACCACCATT CAAACTCTTT TGACGTGTTG 
GAGGACTTAC CGCTACGATA CAGTCGTACT GGAGTCGCTC GTGCCCTGTT TTCGGGCTCT 
GGCCAAACAG GGTCGTTTCT CCTCGACCGC ACCTTCGTCC GGGGTGGGTC AATGGAAGGA 
AGTCGCCGAA CGATTGCACG CGGCGTTGGC GCGCGAAACA CGTCCCGAAA ACGCTCTCCG 
ACCGACCCTG TGGGGACTGC TGAAAGATGC CGTCTTTCGG GCCTTACCGG ACGAAAAGTG 
CGGTTGGTTC GGAACCTTTC AGGAACTGAC ATTGCGGGAA CTATTGCCCA AGGATACAAC 
AACCAACACC GACATTGGTA TGGATAGTAG CAATTCCGTA TCTAACGTTA CCATGGAGCA 
CGGGGTGGGA ATATTGTGGA GTTGGGCGGT AATCCCTCGC TTGGGACGCA CCTTGGCCGA 
ATCCACATCG CTCTGGATTA TTCTAGATAT GCTACACAAT GATCGTTCAC CCCGATCGCG 
GATTCTGGCA ACCCGTCAAA AGGCAACGGC AACTCTCGGA ACCATTCTTA CACACTTTTC 
CAGCACAAAC GATGTTAATG ATGAAAATCC TGTTCCAGAA ACTATGACCA AACAGACATG 
GATAGCGTCC CGCTTGTTGA CTTTACTAGA GACAGAATCG GATCCGGATT GGAGAAGGCG 
CTGTCTACGG ACTTTGCGAT GTCTCTGCTC TTGCTCATGG GGACGACGGA TGCTCGACAA 
TGCATGTACA CATCTTTTGC TACCAACACT GCTTCGCATT GTACGGGACG ATACCGCCGA 
TTCTCCCGAC ACCCGGGTAC AGGCCTGTCA ATGCCTCTCG ACTATGCTGC CCTTACCACC 
GCCTTCGTGG ATCGATTCGC TGCCGTTGGT GGAAACTACT CTGATACAAA CAGCGTCCAA 
AAAATCCACA CCGGACAAAG TCGTATTGGC GGCCTCACAA GCGCTCGCGG CTAGCCTGCA 
ATACAGTCCC TGGAAACGCA GTGCCTCCTG TTTTTCAACA AGTTTTCACG AGCGTGTAAG 
AGATGTTCTA CAAGACAACG AAGCACGGGA GACGTACCAT GTCGCCTTCG GTGAGCTCTT 
GCACCAGATC GTACTCGAAC ACGAACATCA AACCAGCGTT CCAGATCTGC TGTCATCCAC 
TACCATTCTC GATATCATTA CGCTTCTGTT GACTCCGCTC GGTCCCGACT TTGGCTTGAG 
CCGTGACCAC GCCTTGCGGG TAGTGGAGAT TCTGTCGAGG CACGAAAAGA AGAAGCTCGC 
CGATCACGAA TCACTACTGG GTGCCCTCGT CAATCTCTGC CTCGTCACGA GTGGGGAGTT 
GAAAGTCCAG GTAAAAACCA TTGTACTCGA TCTCGTCCCC GAGCTGTAG 

 

Protein sequence

MEGGPVVALD RILHDLAHAL TVSERWRALR RFREILEQDL KQSTHQQCRE REVDVLLVWN 
VQLALQTSDP TLLPDLLECL RSLWAHPPQR HQHHNHHHHA RYTQPDPELE SLSRFRNKVA 
PVADANGTTI QTLLTCWRTY RYDTVVLESL VPCFRALAKQ GRFSSTAPSS GVGQWKEVAE 
RLHAALARET RPENALRPTL WGLLKDAVFR ALPDEKCGWF GTFQELTLRE LLPKDTTTNT 
DIGMDSSNSV SNVTMEHGVG ILWSWAVIPR LGRTLAESTS LWIILDMLHN DRSPRSRILA 
TRQKATATLG TILTHFSSTN DVNDENPVPE TMTKQTWIAS RLLTLLETES DPDWRRRCLR 
TLRCLCSCSW GRRMLDNACT HLLLPTLLRI VRDDTADSPD TRVQACQCLS TMLPLPPPSW 
IDSLPLVETT LIQTASKKST PDKVVLAASQ ALAASLQYSP WKRSASCFST SFHERVRDVL 
QDNEARETYH VAFGELLHQI VLEHEHQTSV PDLLSSTTIL DIITLLLTPL GPDFGLSRDH 
ALRVVEILSR HEKKKLADHE SLLGALVNLC LVTSGELKVQ VKTIVLDLVP EL