| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38535 |
|---|
| Symbol | |
|---|
| ID | 7203489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011684 |
|---|
| Strand | - |
|---|
| Start bp | 336398 |
|---|
| End bp | 336877 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182664 |
|---|
| Protein GI | 219124759 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.22474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTGA TTTGTCGAAA TGCGATTGGT TTGATGCTGT TCCTCCAGGA CAAGAGAGCA
TGGGCGTCGT TTGCGTCGAG AGATCTGCAA GCTGGGGTTC GCCACCGTCG TGTGGTCCCA
TCCAGCGTTC CCTTCGGTCC TTCGCCCGTT GCGTCACCCG ATCGGCGATG CTTCGCAGCC
GCCGCCAAAC CCAAACGAGG CAGCGTTGTA GATTCCTACC AAACCGTTAG CGTGAATTGC
GCCAAGTGCG GTGAGCGGCT CTTCCGGTAC AAGAAGAAGA ACGGGACCAA ATCCAATCTT
GTCAAGTGCT TTGTTGAGCG GATATCGGAA GATTGCGCCG GTGTTTTACG GGATCACGGA
ACGAGTGCGG ATCCGTACAG TTGCCCTTCG TGTCAGACTG AATTTGCCCG GTCCGCAATT
ATACGCGGAC TACCCGCCCT CAAGCTCGTG GGAGGCAAAA TCCGCATGAC GAAAAAGTGA
|
|---|
| Protein sequence | MRVICRNAIG LMLFLQDKRA WASFASRDLQ AGVRHRRVVP SSVPFGPSPV ASPDRRCFAA
AAKPKRGSVV DSYQTVSVNC AKCGERLFRY KKKNGTKSNL VKCFVERISE DCAGVLRDHG
TSADPYSCPS CQTEFARSAI IRGLPALKLV GGKIRMTKK
|
|---|
| |