Gene PHATRDRAFT_38518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38518 
Symbol 
ID7203287 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand+ 
Start bp291697 
End bp292426 
Gene Length730 bp 
Protein Length236 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182507 
Protein GI219124431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0156674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCAAA ATCGTTTGTA TCGTCGGCAT GGTGCTGGCA ACGTTGCGAT TTTCACCGGC 
GGCTTTCATT CGGACGACCA CGAGTCGGAC AAGGACATTC ACCAAGAGCA ATCTTTCAAC 
AAACAGTAAA ACTCAACGGT TCAGTTTTTT GCGAGAACTA TGGGACGAAG TGATTGAGTT 
TAGTACGCTC GGTCCGGGGG AGCGTAAATT GCTGAAACAA CGCAGAATCC AAAATGCATC 
AAAACGGGAA GGCGGCAGCA ACATCGATGA CAAGTTCAGC TTAAGGTCTT TCCAAGCAGC 
AAAAGAAAGG GATTGCAAAA TGAACAGCGA GGACGTCAAC ATGGACTTGA ACGGGATTTT 
GGCAAAAGAA GTAACGGGTT TGACAACAGG GATGGAGCCT GTACAAGATG TGGACGGCTA 
CGCTCTATGT GATTTACTTG TGGCCCGATG GGGGGCTCCG TTGGACGTTG ACTTTGTACG 
ACAAAACAAT GCTGTCTATT GTTCCGTCAT GCCCGTCTCG TTTGGCTCGC GCAAATGCCG 
ACACATCAAC AAACTTGACT ACCTTATGCA CCTGCAAGGG ATTGTTGAAG TCTTACGCGC 
GTACAGAAAT TTGGATCCGT TCATAATGTT TTTGTTGACG ACAAATAAGA AACCCAAAGC 
TGGGACCGAT GCAGTGCTGT TTCGGCTACA GCTATCTGAT GAGCAGAGAA ACCATATTCT 
ATCTTCATAA
 
Protein sequence
MLQNRLYRRH GAGNVAIFTG GFHSDDHESD KDIHQEQSFN KHFLRELWDE VIEFSTLGPG 
ERKLLKQRRI QNASKREGGS NIDDKFSLRS FQAAKERDCK MNSEDVNMDL NGILAKEVTG 
LTTGMEPVQD VDGYALCDLL VARWGAPLDV DFVRQNNAVY CSVMPVSFGS RKCRHINKLD 
YLMHLQGIVE VLRAYRNLDP FIMFLLTTNK KPKAGTDAVL FRLQLSDEQR NHILSS