Gene PHATRDRAFT_38465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38465 
Symbol 
ID7203261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp183180 
End bp183923 
Gene Length744 bp 
Protein Length247 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182630 
Protein GI219124689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.809364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCG TTGCAGTAAT CGGAGGCGCT TCCATCCAAA AACTTCGTTT TTCTGACGTA 
AACGAAATTC GCGAGTTTAC GCAAGAGCAT CAGATCGTCT CGGATGAAAT CTGGTTCGCT
AGTGAGGAAT ATGCGGAGAT AAAGGCAAGA TCGCGACTAG AGGTGAAAGA GTGGAGGCGA
CAAGGATTTG GTGTCCTACT TAAGGAATCG TTTGAGTTAC CCCGAAAAGA CACGCAGTCC
TATATAATTG CCTTCTGCCA ACTAGAGGGG AGCCTTTCTC GACGGGGCTT GGAGCGACAG
CTGTCACGAC AGCACGGAGA GGAAAGGTCG GACCTGAAGG ATCGCTCGCG GCGGGCGGTG
ATCACTCATC AAATGCGGTT ACTCCGACAG GGGCTTCCGT TAGACGAAAT CGCTGAGCAA
CTAGGGCTTC TATATCGAGA AATCACTCGT CCAGCCAAGA TTTTTGCCCG ACGTATGGCC
AAAGGTGATG AGATCGTCGC GAAAGAGGGA GAGAGCAACG AGCCTGCCGA AAAGATTCTG
GAAGAGCGCG AACGGAGAAA TCGCCATCAA ATGATGGAAC GCAGGTTATC CAACTTTTCC
AGCATGTCTG GAATGTCCGG GACCTCGCTC GATTCTATTG CATCCAGAAG GCGGTGGAAC
AGCGTCCCAG GTAAGGCACG AAAACCGCCG TGTCCTGGAT CGCCAGCTTC ACCAGTGGAG
GAGTACTACG CCGGAATTGC GTAA
 
Protein sequence
MNAVAVIGGA SIQKLRFSDV NEIREFTQEH QIVSDEIWFA SEEYAEIKAR SRLEVKEWRR 
QGFGVLLKES FELPRKDTQS YIIAFCQLEG SLSRRGLERQ LSRQHGEERS DLKDRSRRAV
ITHQMRLLRQ GLPLDEIAEQ LGLLYREITR PAKIFARRMA KGDEIVAKEG ESNEPAEKIL
EERERRNRHQ MMERRLSNFS SMSGMSGTSL DSIASRRRWN SVPGKARKPP CPGSPASPVE
EYYAGIA