Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38465 |
Symbol | |
ID | 7203261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 183180 |
End bp | 183923 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182630 |
Protein GI | 219124689 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.809364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCG TTGCAGTAAT CGGAGGCGCT TCCATCCAAA AACTTCGTTT TTCTGACGTA AACGAAATTC GCGAGTTTAC GCAAGAGCAT CAGATCGTCT CGGATGAAAT CTGGTTCGCT AGTGAGGAAT ATGCGGAGAT AAAGGCAAGA TCGCGACTAG AGGTGAAAGA GTGGAGGCGA CAAGGATTTG GTGTCCTACT TAAGGAATCG TTTGAGTTAC CCCGAAAAGA CACGCAGTCC TATATAATTG CCTTCTGCCA ACTAGAGGGG AGCCTTTCTC GACGGGGCTT GGAGCGACAG CTGTCACGAC AGCACGGAGA GGAAAGGTCG GACCTGAAGG ATCGCTCGCG GCGGGCGGTG ATCACTCATC AAATGCGGTT ACTCCGACAG GGGCTTCCGT TAGACGAAAT CGCTGAGCAA CTAGGGCTTC TATATCGAGA AATCACTCGT CCAGCCAAGA TTTTTGCCCG ACGTATGGCC AAAGGTGATG AGATCGTCGC GAAAGAGGGA GAGAGCAACG AGCCTGCCGA AAAGATTCTG GAAGAGCGCG AACGGAGAAA TCGCCATCAA ATGATGGAAC GCAGGTTATC CAACTTTTCC AGCATGTCTG GAATGTCCGG GACCTCGCTC GATTCTATTG CATCCAGAAG GCGGTGGAAC AGCGTCCCAG GTAAGGCACG AAAACCGCCG TGTCCTGGAT CGCCAGCTTC ACCAGTGGAG GAGTACTACG CCGGAATTGC GTAA
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Protein sequence | MNAVAVIGGA SIQKLRFSDV NEIREFTQEH QIVSDEIWFA SEEYAEIKAR SRLEVKEWRR QGFGVLLKES FELPRKDTQS YIIAFCQLEG SLSRRGLERQ LSRQHGEERS DLKDRSRRAV ITHQMRLLRQ GLPLDEIAEQ LGLLYREITR PAKIFARRMA KGDEIVAKEG ESNEPAEKIL EERERRNRHQ MMERRLSNFS SMSGMSGTSL DSIASRRRWN SVPGKARKPP CPGSPASPVE EYYAGIA
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