Gene PHATRDRAFT_38426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38426 
Symbol 
ID7203416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp69598 
End bp70407 
Gene Length810 bp 
Protein Length269 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182467 
Protein GI219124348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAGG AGCCTCTTTT TGTACTGGAC AGTAGCCGTC AGCATCATGC CTGTTTGAAA 
ATTGGTGCAC CTATTGGGAA AATCCCTTTG TCGTTGTGCT CTGCGGAGAT TGAAGACGAG
CCACTTCTTT CTTTCCGACA TCTATCTCGC CAACAATTCT GCGTTCCTAA TAGGATCCAA
CGAAATGAGC CCCAATTGTT TCGCAAAGCT CCAAAGTGTC GCAAGCAATT GGTTCACTTT
GGATCAGTAT CGTCCGACGG ACCTCTTACC ATTCCCAAAG ATTGCAGCAC CGTCAAAGTC
TCGCATACGC CTGATCCTTG CAAAGGCGAC TCATCCAGAC ACGACCTGTG GCTAAATGAC
AACGATATTC GACGCTTTCA GCGGTGCGCA CGGGCCAGGG CTAGCGTTTA CGTCGCTTTG
AAGCCACATT ACGCTAGGTC CATTCTCGCC CTAACGTCAA ATCCCTTTTG TACCAGTTTT
TCACACGGCG AAGCGTCTAC AAGTTATCAT ATCGAAACTA TTGCCTTTGG CCACGCCCGT
GGTTTGGAAC AACGAATTGT CCCTCAGATG CGGACTGCGC GGAAGCGTGC AGTATCTCAT
GTGCTGCTTA TGCAAGAGAA GCTCAAGCAA GACAATTTTG TTGATCGAAG AATGATGGAG
CTGCTGATCC AGCAAAAAGC TCAGGAGTCA TCTCGACGCT CACGACAGCT CGCATTACAA
TTGGCAAAAG CAGATGCACT AGCTGCCCGT CGAATTCACC AAATGCCGTG TCACAGCCAA
AATAGCATTG TAATAACGCC ATCAAGCTGA
 
Protein sequence
MMEEPLFVLD SSRQHHACLK IGAPIGKIPL SLCSAEIEDE PLLSFRHLSR QQFCVPNRIQ 
RNEPQLFRKA PKCRKQLVHF GSVSSDGPLT IPKDCSTVKV SHTPDPCKGD SSRHDLWLND
NDIRRFQRCA RARASVYVAL KPHYARSILA LTSNPFCTSF SHGEASTSYH IETIAFGHAR
GLEQRIVPQM RTARKRAVSH VLLMQEKLKQ DNFVDRRMME LLIQQKAQES SRRSRQLALQ
LAKADALAAR RIHQMPCHSQ NSIVITPSS