Gene PHATRDRAFT_38413 details

Gene Information

• Locus tag: PHATRDRAFT_38413
• Symbol: TRD2
• ID: 7203440
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 44773
• End bp: 45555
• Gene Length: 783 bp
• Protein Length: 260 aa
• GC content: 52%
• Product: TRD2
• Protein accession: XP_002182600
• Protein GI: 219124626

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0515629
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAAAC GATTGTCAAT CCTAGCGACG GCGTTCGCCA TCCTCACCGG AACAGCTATG 
TTTCTGGGAC AGGAAAACGG CGGGAAAGAC AGTACGAGCT TCACTGTCCC TGAAGCCGCA 
GAGGACTGGA AACTTTCCCA AGACCAACAG GGTCGACAGT TGAGATTGAT TCGCATTCGG 
GCGATCCCCT TCTGGAGGTC ACCTCCCGCC CCCACTCCTC CTGCCCCCAC TCCCCCTGCC 
CCCGTTCCCT CGCCAGTTGC TCCCCCACCG CCTGTGCCTG TACCGGTAAC TCCCCAAACT 
GGGGCTGCGG GAGCCGATAC TTTTCGAGTG AAACTCTACT GGGAGACAGG CTACTACTGG 
CAATTCGAAT CCTACGAACG AAAATGGTGC TGGAAATGTA TGAACGGATG CACTGCAGGT 
TCGTCGGTTG AAATCGTTAA TTGCGACAAT CCTTCGGGCG ACGGTGGAAA TCCAAGTTAT 
TTCCGATTCA TTCAAGGTAG TGGCGCCGTG ATGATTCAAG AAATTACGAG CCAGCTCTGT 
ATTCAACGTA CCGGTAATTT AGCGATTTCC CTGGAGCCCT GCAATAGTGG ATTATCACGA 
CAATTGTGGA CAGCTGGACA AAACGGACAA TTTGCGTGGG GTAAAAAGTT CGAGATTACT 
CCTACGGATT TGCCAACCCA GTGCATTACA CAACGTCATC ACCCCCAAAT GTGGGAAACG 
GTAGCAATTG AACCAACGGA TCTAGCCCGT CATTCGGATA CATCCTATTG GAATATGTAC 
TAA 

 

Protein sequence

MIKRLSILAT AFAILTGTAM FLGQENGGKD STSFTVPEAA EDWKLSQDQQ GRQLRLIRIR 
AIPFWRSPPA PTPPAPTPPA PVPSPVAPPP PVPVPVTPQT GAAGADTFRV KLYWETGYYW 
QFESYERKWC WKCMNGCTAG SSVEIVNCDN PSGDGGNPSY FRFIQGSGAV MIQEITSQLC 
IQRTGNLAIS LEPCNSGLSR QLWTAGQNGQ FAWGKKFEIT PTDLPTQCIT QRHHPQMWET 
VAIEPTDLAR HSDTSYWNMY