Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37436 |
Symbol | |
ID | 7202314 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 145763 |
End bp | 147155 |
Gene Length | 1393 bp |
Protein Length | 431 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181667 |
Protein GI | 219122676 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.17911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTCGGT GGATAACACT TCTTTCGGCT GATTCAGTAT CTTTATCGGA TATTATTCTG GCTCCCTCAA ATTCTCTCGT GCAGCTAAGT AAGGACGCTT CTTTTCATCC CGGTTACTCC GATACGAACA ACCATGTTAT GAACGGCGAC GGCTTCGGGG TGGGATGGTA CCACACCAAC GTCGCAACAT GTCCTTACGA AGAAAGTGTA CACCCATTTC ACACGAAGGG CTTCCACGGA TCCGACGAAC ATAAGGGCTC CAGCCAAACT TTAGCAGCGG TCTTTAAAGA TACTCAACCA GCCTGGAATA ATGCAAATTT GCGGGAGATT TGCATGGCAA CCCGAAGCGA CTGCATCATT GCTCACGTTC GTGCTGCTTC CAAGAACACC GGAGTCAGTC AGGCTAATTG CCACCCCTTT AAAGCAGGAA GACTATTGTT TTGCCATAAT GGACGGATCG ATAATTTTTC GCTCATCCGG AGAGCCATGA TGGCACACTT ATCCGACGAA GCCTACGTCG CTGTTCGTGG TACGACCGAT TCCGAATGTA TCTTTGCCAT GATTCTGACC TACCTTGCTA GAGACGATAG TGGTGAGCCC TCGCCCTTTG TCCAAACGAC TACATTTGGA CACAGTCGTA TTGCTGCGGC CATTAAGAAG ACTTTGCGCA CGATCGAAAT TATGCTGCAC GAGCACGGTC TCACGGAGGG CTACTGCACC TTCAATTTCT CATGTACAGA TGGAGAGTCG GTTGTTGTCA CGCGCTTTTG CGACAAGTCA CCCGATATTC CACCACCTTC CCTGTATTTT GCTTACGGCA ATGCCCAGAG ATTGTATAGT GAACTCACAA GCGAAGACCC TGTTTCGTTT GTTAGTCAGC AGAGTTCATC GGACGACAGT TCGTTGGACA AGGCCGATTC CGACAACGGT AGTGATACTG ATTCGGAGAC GACCTATAAC GAAAAACCAG TTCTTTTAGA CAAACTCGAA AGCAGGCCGG GCCGTCTCTT TCCCGATGTC GATGCCCAGA CGGCCTGCTT TATTGTGGCC AGGTAAGTGT CTTACTGTTA GTTGTAGACA CCTCCCTACT TCCTTGTTCT CGATCTGAGT TTTTGGCTCA CAAGCTTGCG AATGACCTGC AATTTTTAGC AATCCTTTGA CTCGGACGCA CACATGGCAT CCAATGCCGC GTAACTCGAT CATGTGGTGC ACGCGTGGAT CCCCTCCTGA GCTTCGTTTG TTGCGTTTGC GCTCTCGCAC GGCCTCAATG CTACGCACGC ATCTGCCCAC GAAAGGCGAC TTGGGATTTT CGATTGTGTC GACGCCTCCG ACGCTCAAGG ATCTAGAGTT CATGAACCTG ACGGAATCTG ATATTGTGGG CCAGGCTGCC TAG
|
Protein sequence | MCRWITLLSA DSVSLSDIIL APSNSLVQLS KDASFHPGYS DTNNHVMNGD GFGVGWYHTN VATCPYEESV HPFHTKGFHG SDEHKGSSQT LAAVFKDTQP AWNNANLREI CMATRSDCII AHVRAASKNT GVSQANCHPF KAGRLLFCHN GRIDNFSLIR RAMMAHLSDE AYVAVRGTTD SECIFAMILT YLARDDSGEP SPFVQTTTFG HSRIAAAIKK TLRTIEIMLH EHGLTEGYCT FNFSCTDGES VVVTRFCDKS PDIPPPSLYF AYGNAQRLYS ELTSEDPVSF VSQQSSSDDS SLDKADSDNG SDTDSETTYN EKPVLLDKLE SRPGRLFPDV DAQTACFIVA SNPLTRTHTW HPMPRNSIMW CTRGSPPELR LLRLRSRTAS MLRTHLPTKG DLGFSIVSTP PTLKDLEFMN LTESDIVGQA A
|
| |