Gene PHATRDRAFT_37270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37270 
Symbol 
ID7202041 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp574557 
End bp575878 
Gene Length1322 bp 
Protein Length387 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181229 
Protein GI219121762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000276277 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTCA CATTTGTTTT ACAAGTGTAC GTTAGCACAA ACGAAATAGC GTTTGTTTAC 
CAGCCAATAC CTATGATTGG CACGCGGTTT ACTGCGTCAG AGTCCCGTAT AAAGACAGAC
GACACCTGGC GCGCTACTCG CAAGCATTCC AAGCAAGCAA TAGAATACAT TGCGTCGGAA
CCAGTTCCTC GACCTTCGAT CGAAACTCTC GTTACTAGAC AAAACGTTAC GGGGGACGTT
GCGTGGCTCC TAAATTTGGC CGTGGTGGGA TTCCCCAAGT GCGGCACATC CTTCATGATG
CGCTATCTCG GTCGACACGA AGAAATAGCC ATGCTGACTG ACGGTGAACA CTGCGAGTTG
TCGACGGGTA CACAAGACTC TGTCCTTATC AAGGCCCTGA TGGATGGGCT TCCCAGCGGT
AAGATAGCGC GCGGCTTGAA ATGTCCGCGC CAGTTGGAAA GCCCCAGGGC CATGCTGAGC
CTCTCCCGGT ACTTCCCGAA CACAAAGATA ATTGTTGGAG TCCGACATCC TGTCCTTTGG
TAAGTAGTAT GCTCGAATAC AAGTATCGAT ATCCGGAAAG GGCTCTATCC TGATTTCTTC
TTTTGATGAA ATTGGAACAG GTTTGAATCC TTCTACAACT GTAAGTGAAT ATGTGCTGAA
TCCTTCTTTC GGGACTGTCT TTGTACGATA ACTCTCATCC AACATATTTG TAATCAGTTC
GCCAGCAACG CACTTGGTTC AACCTGCTGC CAGCACAGGA ACTGATTGGA AAATGTGCGG
ATTTGGGGCC CTTTGAAAAC GTGGCTTCGG TCTGTACCGA AAGAGCCAAC TTCCACGAGC
CTTTGGCTCG CTTGGGAAAG ACGAGCATGC AGAGCGCAGA TGAGCAACAA TACTTTTCGG
CCGACGCGCA GAATGTTTCA GACAACGTTG ATTTCTCCGA CAAGAAGATC TTTTTGTACG
ACCTCGCCCA GCTCCAGGAC AAGGACCAAG ATCGTTCTCA ACTGCTTCTA CAAGACTTGC
AGAACTTCCT GCAAGTCACA AAGCCCTTCC AGACGATGGT GGCAGAGCGA CAACCAGTCT
CAAACGTAAC ACGCATTGAT ATTTGTGACC CCGAGTACAA CCGTTTACGC GAGGTACTTG
TGGATACTGG AGTGAAGGCG TCGAGATGGA TTCGGCGATT TTTTTTTCAT GCCAAAGGTG
TGACGGTGTC GTCTCCCAAA TTTTTGGACC AGGTGTTGGC CAAGTGGGAA GAAGATCCGT
GCGAAGAGCG CCGGGCCAAG AGCAATTCCG CCCTGTCCCC GCCGAATCGG ACTACCTCGT
AA
 
Protein sequence
MAFTFVLQVY VSTNEIAFVY QPIPMIGTRF TASESRIKTD DTWRATRKHS KQAIEYIASE 
PVPRPSIETL VTRQNVTGDV AWLLNLAVVG FPKCGTSFMM RYLGRHEEIA MLTDGEHCEL
STGTQDSVLI KALMDGLPSG KIARGLKCPR QLESPRAMLS LSRYFPNTKI IVGVRHPVLW
FESFYNFRQQ RTWFNLLPAQ ELIGKCADLG PFENVASVCT ERANFHEPLA RLGKTSMQSA
DEQQYFSADA QNVSDNVDFS DKKIFLYDLA QLQDKDQDRS QLLLQDLQNF LQVTKPFQTM
VAERQPVSNV TRIDICDPEY NRLREVLVDT GVKASRWIRR FFFHAKGVTV SSPKFLDQVL
AKWEEDPCEE RRAKSNSALS PPNRTTS