Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35858 |
Symbol | |
ID | 7200859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 915617 |
End bp | 916312 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180141 |
Protein GI | 219118748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000296008 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACGA TTTTTGGCAA ACAGACTGTA GCGGAGCCCG CCTTTGAGGT GTTGTATCGG CAGACGCAGC AGGCTTACGA AATCCGGCGG TACGCGACGC GTTTTGCGGC GTCCACTTCA ACGGATGCGA ACTCGGACAG TGCTCCCTTC AACGCTCTCG CTCGCTACAT CGGAGTCTTT GGGACACCGG AGAATCAAGG CCGGACGGCG ATTAGTATGA CCGCTCCCGT GGTCAAGGAA GAATCATCGG GTTCATCACA ACCAGAGGCC ATGGCTATGA CGGCGCCCGT CGTCAAGACG CCGTCCGATC CGAATGGCGA GGCTGGAATG GTGATGAAGT TTATTCTTCC GGCGGCGTAC GACTCCATGG AGAAGATTCC GCAACCCACC AATCCACGCG TGCATATTGA GGAAATTCCT CCTGCGGTGG GAGCCGTGCA CCGGTACTCG GGTAGTTTCG ATGACACCGT CTCGAGGAAC AAAGCCCGAT GGTTGGCGCA GCAATTGCGA GAGGATGGGG TGGATATTAC CGAAGATTAC GCCGTCGAGC ACTATCAGTT TTGGGGATAC AATCCACCGT TTACGCTACC CATGTTCCGT CGCAACGAAG TATGGATTGA ATTGGACGCG ACGCAGGTTG ATCAGATTGT GAACGGCAAG GGAGGTGCGG CGAGTTCTAC GTCGGCCGTC AACTAA
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Protein sequence | MGTIFGKQTV AEPAFEVLYR QTQQAYEIRR YATRFAASTS TDANSDSAPF NALARYIGVF GTPENQGRTA ISMTAPVVKE ESSGSSQPEA MAMTAPVVKT PSDPNGEAGM VMKFILPAAY DSMEKIPQPT NPRVHIEEIP PAVGAVHRYS GSFDDTVSRN KARWLAQQLR EDGVDITEDY AVEHYQFWGY NPPFTLPMFR RNEVWIELDA TQVDQIVNGK GGAASSTSAV N
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