Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35445 |
Symbol | |
ID | 7200465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 937467 |
End bp | 938003 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179749 |
Protein GI | 219117928 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0464458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGGCCC ATAACGTGTT TACTTCGTTT CAGGGATTGA CAATGCTGGT GTCACAGCAG CAGAAAATTC TCAGTGGCTT GATTGATACC TACTGTAGAA TGTCCGGGAT GGCTGGGCCC CTTGAACAAG AACAGATTGA TGCTATCATT TCAAAAGAGC CAGCTGAGAG AAACGGAAGC TATGTTATCA CTCACAATCA GGTTCGGTCG TGCCTTGATG GGCTCGGCAT GTGGATGATC GAAACAGTCG AAGAATCGGC GTCTGATGAG GAGAAACTTT CTTGTTTGCT GGCCAGCATT GGTAATTTAT TTGTGGTTGC AGCAAATGGC ATTGCCAACA TTGCAATTGT ACGCAGTGGA AACAAATCAC AGGCTGCAGA ACTACCGCCG GAGCTCCCAT ACGAGCTTGC TGCAAGCAAC ATGCGAGATT TTGTCAAGAC AATTCAGAAG CACCGAACAC GATTACAGCG GAAATTTTCA GACGAAGAAA TTGACCAACT TAGTCGAGAG TTTAGCATAT TTCTCCGAGC GTACTGA
|
Protein sequence | MEAHNVFTSF QGLTMLVSQQ QKILSGLIDT YCRMSGMAGP LEQEQIDAII SKEPAERNGS YVITHNQVRS CLDGLGMWMI ETVEESASDE EKLSCLLASI GNLFVVAANG IANIAIVRSG NKSQAAELPP ELPYELAASN MRDFVKTIQK HRTRLQRKFS DEEIDQLSRE FSIFLRAY
|
| |