Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35419 |
Symbol | |
ID | 7200452 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 868555 |
End bp | 870247 |
Gene Length | 1693 bp |
Protein Length | 496 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179930 |
Protein GI | 219118305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGCGA ACTCTACGAC TGCATCAGAG GGAACGGGTC AAAGCAGTCT AAAACCGGTT GCCGTATCTT CCACTTCGTC GCTCGATAGC TTTTTCGCCA CGAACTTTGC TAGTGGGACT AGTCCAATTG CTGATACCGG AAGTCCGGCA TACGAACACA CGTTGGATTT TACCATGAAC GCGACTTCAG AGACGGCTTC GGAGCCGACG GATACAACCA CGCAACAATA CATACCGCAC TCTTCCGCTG GACTGAGCAG CACTAGCTCC GTTATCTCGC CGGCCACCAC GCAACCAATG CCGGCAGGGC ATCAACTTTC GATTTTGAAT CCCTTGATGC TACCTTCAGC ACAGGTACCG ATGTTGTCTA CCGCTGCAGG CAATGTACCA ATACCAGGGA CTCCAGGGAA CAACTCGATA CCAGAGTTCC TCTATCAGCT AACAAAGATG CTGACGGATA ACAACCGAGA TATTATTGAA TGGACAAATG GTAAGTTGGC AGTGTTTCGG CATGCTATCT TAGCATCACG TACCTAGAGC GACGTTCAAA CAGAAATCAG GAGGTTGCTG ACCCGGTTTC GAACTTTTTT GACTTGGTGA TGTACAGGCA AGATTGAAGT ACACAGTCCT CACAAACTGG AAGCGCAAGT ATTACATAAG TACTTTCGGC ATTCCAAGTT CGCATCTTTT CAAAGACAGC TCAATTATTT TGGTTTTCGT AAATTGGCGG GCAAAGGCAA GATGGCTCCG TGTTCGTACG TCAACGAGGA TTCCAAAGGG GACATTGGAA GCCTGTTGCT AATCAAGGTA AGATTTGCGA GAGAATACCA AAGAGCGATA AGGACCATGG CAACGCCGTC TTACATACAT CGATCCTTTT CCCTTGTTAC AGCGCAAAAC AACAGCGTCG ATTTCGCTAA AAGATAAAGA CAAGCTGAGT GGGAAGAAAC GGGATGCCCC TACCAGCAAG TCGCCAAAAA TCCAACCGAC CTCGAATGAC CCACCTTTAG TCAATCCAGT ACTAGCTGGT ATTCTATATC GATCAAAGGG AGCGTCATCC GCACCAGCTG GTTTGCTGCC AGACACGGCA AAGCTCAGAC CTTCCGTCCT TTCTCAATCC AATATCAAGC CCGGGTCATC ACATCAAGCT TTGGCACAAA CCGCGGTGGG CCGTGGAATT CGACACGGGT ATACTGCAGC GTCATGTGGC AAAAGTGTTC CAAGGCAAGC TCTTTCGACT AACTCCAAGG CAGAAGCGAT GACATCCGCT TCTGCCTCCT CCAGCCAATC TGATTTAGCC TCGGCTGCCT TGAACCATTC ATCATTTACT TTTCCTGAAT CCACAGTAGA CAGTCTATCA CAGCTCGCTA GTAATTATCA GAATACTTTG ACCGGAGGCC AATCCAATGA CGTGGAGGTT GAGGCAGAGC CTACGCCCTT GGAGCAACTA CGATCTCGGA CTACTTCTCC TAGCGGATCA CATAACAACT ACGTCTGCTT CTTGAGTCGC AATTCTTCAT TGGTCGATCT AGCGATGATA CCTGGGATTG ATGAGGATTT GCAGCCAAGT ACGGATACAA ACTCTTACGG ATTAAGCTTC GTTGACTTTC CCAATCCTGA AGTACATCCG AGTTCTTCGT CAGTCGCTAC AGGGAACAGT GCTGACGAAC AGGGAGAATC TGCGTCAAAA TAG
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Protein sequence | MEANSTTASE GTGQSSLKPV AVSSTSSLDS FFATNFASGT SPIADTGSPA YEHTLDFTMN ATSETASEPT DTTTQQYIPH SSAGLSSTSS VISPATTQPM PAGHQLSILN PLMLPSAQVP MLSTAAGNVP IPGTPGNNSI PEFLYQLTKM LTDNNRDIIE WTNGKIEVHS PHKLEAQVLH KYFRHSKFAS FQRQLNYFGF RKLAGKGKMA PCSYVNEDSK GDIGSLLLIK RKTTASISLK DKDKLSGKKR DAPTSKSPKI QPTSNDPPLV NPVLAGILYR SKGASSAPAG LLPDTAKLRP SVLSQSNIKP GSSHQALAQT AVGRGIRHGY TAASCGKSVP RQALSTNSKA EAMTSASASS SQSDLASAAL NHSSFTFPES TVDSLSQLAS NYQNTLTGGQ SNDVEVEAEP TPLEQLRSRT TSPSGSHNNY VCFLSRNSSL VDLAMIPGID EDLQPSTDTN SYGLSFVDFP NPEVHPSSSS VATGNSADEQ GESASK
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