Gene PHATRDRAFT_35150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35150 
Symbol 
ID7200551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp171342 
End bp172487 
Gene Length1146 bp 
Protein Length381 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179806 
Protein GI219118046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.397673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTG CTTCGGGCCT TTCCCGTTCA GCTTTGGCTT TTCGTTTGCT TTCTCCTCAA 
GTCGTGGCTC CACGGGCTTC CAAATTTCCA GGTTCTATTC AAGTCTCCGC TGTCATTTTC
GTTGGACTTA GTACGACGCG GAGGAATTGC TCCTTTGTAA GCATGCAGTC CAGCCTGGAC
ACCCCACCGC TAATTGACGT GGACTGCAAT CTCATGCATA TTGATTTACA ACGGTTCCGG
ATTGACAGCT TGGCAAACGA CAAAAGCCTG GCAACACCCT TGGATATTTT GCTCCAGGAC
GCCGTACAAG AGCAAAATAT TGTAGGGATA CTTTCTCCCA GCAGTACCAT TGAAGAAGCT
AAGGCAAGCG CTCATGTTCT ACAACAAGTT CCGCTAGATA CCTTGGTTAT CCGATCGACC
GTTGGTGTCC ATCCTTATCA TATAAACGAT GCTAATTTGC GAGATAAAAG TTTAGAGCAG
CACATGGAGA TTGCAAAAGA TCTGTTGCGT TCCAAACCAG TACTCTTTAC TGCTGTTGGT
GAATGCGGAC TTGATGCCTC AGAGGGATTT CCTCCCGTCG CTTCTCAGAT ACCATGGTTT
CAAGCGCAGA TTGAAATTGC AGAAGAGTTG CAACTTCCAC TTTTTGTCCA CGAGCGGCTA
GCATTTGATG CGACCATGGA TTTACTTCAG AACGTCAATG TCCCCATCAT AATTCACTGC
TTTACTGGAA GCTCGGGTGA GCTACAAGCT TACATCAAAC GTGGTTATTC TGTTTCAATA
TCTGGTTTCA TTTTTAAAGA GGAAGCCGCA GGCATTTGTG AATGCTTGCG TGATGGTGTT
GTTCCTTTGG ACAAGCTCAT GATTGAAACT GACGCCCCGT ACATGGGTTT TGCGGGTTGT
CGGGATCGTT ATGTTGCCAA AAACGATGCA TTTGTACAAA CCCTGAACTC GAAAAAGCGC
AAGCGACTGC TCAATTCAAC TTATCCCAAC GTGCCCAGTT CTTTGCCAGC GATTTTTACG
AAAGTCTTGG AAGAAATGAA CACGGGACGA ACAGAGAGAG GCTGCGCTAG CTTGTCGGGC
TACGAAATGG CATTGCACCT CAACCGCAAT GCCAATGGCT TTTTCAAGTT TGGACTAGAT
ATGTAA
 
Protein sequence
MAIASGLSRS ALAFRLLSPQ VVAPRASKFP GSIQVSAVIF VGLSTTRRNC SFVSMQSSLD 
TPPLIDVDCN LMHIDLQRFR IDSLANDKSL ATPLDILLQD AVQEQNIVGI LSPSSTIEEA
KASAHVLQQV PLDTLVIRST VGVHPYHIND ANLRDKSLEQ HMEIAKDLLR SKPVLFTAVG
ECGLDASEGF PPVASQIPWF QAQIEIAEEL QLPLFVHERL AFDATMDLLQ NVNVPIIIHC
FTGSSGELQA YIKRGYSVSI SGFIFKEEAA GICECLRDGV VPLDKLMIET DAPYMGFAGC
RDRYVAKNDA FVQTLNSKKR KRLLNSTYPN VPSSLPAIFT KVLEEMNTGR TERGCASLSG
YEMALHLNRN ANGFFKFGLD M