Gene PHATRDRAFT_35101 details

Gene Information

• Locus tag: PHATRDRAFT_35101
• ID: 7200525
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 60881
• End bp: 63004
• Gene Length: 2124 bp
• Protein Length: 570 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179569
• Protein GI: 219117552

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATCCG CTCTACAGAA TCTGACCATC TTTTACCGTC ACTCCCTACC GAAATTATCC 
CTATCCAGTC CTCCCGTTTG GGTACTATGT GCTTGCGGAT GACAATCCAG TGACTGGGGC 
AATTCGAAGC GAATCGAAAG AGTATATTGG TTGTCCCTGG TGGGTTTTTG ATTTCCTCGT 
TGAATCGGTG GTGTGCCTTC TATTGGCGGT GACTGCGACG GCAGTCTTCA GAAGCGCTGC 
TATGAATCGC GTCGCAACCC ATCTCTCACC TCGCGTACAT TCCGTGGGAC GTGCAGTAGC 
TCCAAAAGCG TGGTGTCCCC CCACAGTTTT ATGGAGTGGA CGAGTGGTTA CTGCTACGTC 
ACCACCATTC GGAAACGGTC AGGAATCAAT CATCATGGAA CAGCCTGCCG CCGTTGTCGT 
CAATTCAGAA GGCTTGATTG CAGACATTCT CACAAACGTT ACAGAGGCGG AAGCTTGCCG 
ACTTTCTCAG TCTGAGAACT GCGAATTTGT CAATCTGGGT CCATCCATGG TTTTGTCACC 
CGGTATGATC GACGTCCATT GTCATATTAG CGAACTCGGT CGGGATTGGG AAGGATATCA 
CACGGCCACC CGAGCAGCTG CTGCCGGAGG AATCACCACT CTAGTGGGAA TGCCTTTGAA 
TTCTATACCA TCAACTACGA CTGTGGATGC TTTGGAGCAG GAAATTGAAG CTGCACTCGA 
TACGACTCTA CTGGCGGACG TTGCGTACTG GGGTGGCGTG TACCCAGCAA TCTGAAAAAT 
GATGCGTTCG AGCTCAAGGC CCTCTTGAGC GCAGGAGTCT TCGGGCTCAA GGCCTTTTTG 
TCTCCCCTTC CACCGAATGC TGGCTACGAG TCGGTATCGC CTGCGCAGCT TGCTGAAGCG 
GCCAAGATAT GCGGCACATA CGATCGACCT ATTTTGGTAC ACGCGGAGCT CATGTCCCTG 
GACGTTTGCC AAGAACGTTT AGAGGATGCG TACCGTGGGC AATCTCTAAA ATCCTATAAA 
GCACATGTTC AGTCGCGTCC ACCCCAGTGG GAACAAAATG CCGTGCAGGT TGTTTGTGAT 
CAGACCATGC ATTGCAAAAT GCATATTGTC CATTTGAGCG AAGCATCTTG TCTGGAAATC 
ATTGCTGCAA CGAAGAAGCA CCTTGAGAAA TTCGCAAAGG AGCAAAATAT TTCTGTGGAA 
ACTTGCTCGC ATTACCTACT GTTTGACTGT GACAGCATTC CTGACGGTGA AACGCGTCTC 
AAGTGTTTTC CACCAATTCG AAACAAAGCC AATCGCGAGT TGTTGTGGAA CACTGGCATT 
CGTGGCGGCT TGATATCCAT GGTGACATCC GACCATAGTC CATGTCCGTC GAAGATGCGC 
AACCTGGACA CATTGAACGT AAAAGATGCC TGGGCTGGGC TGACTTCTCT ACAATATCAG 
TTGCCGGCTA CTTGGACTGC CTCTCAAATG CGAGGGCTCG ACTATTCCTT GGTCGACATG 
GCACGGTGGT GGTCGCTTAG CCCTTCCACA TTGCCGACGG GAATGAGCGA TATAAAGGGA 
AAAATTGCGA TCGGTCATCA AGCGGACTTC GTGGCTTGGG ACCCCCAGTA CACTGGGCCG 
CCCAACGGCA ACAGCACAGA ATACCATCGA TGGAAGGATA GCTACTTGGG CACAATGTCT 
TTGCGGGGTA GAGTCATTGG TACGTGGCTT AAAGGACAAA AAGTCTACGA TGGCTTTGCA 
GACCGGTTCA TTTCCTGTTC TACGGATAAT TCACTGGGCA GAGTGTTGCT AGCCTCGATG 
AATCCCAGTC CCGACTGAGT CGATATTCGT AAGAACCATG CGTACTCCGT AAAATGGAGG 
CTTTCTGTAT TGCTTAGAAT ATGAAATGAA TGTTTTACAA AAACTTTTGT TTCCCAATTG 
GTTGATGTCA TTTTTTGTGG ACAGAGAGGA CGCAAGCAAC CAAGGTTCTC TTGCGTATGG 
AACGTGTTCT TTTGCAGACG GAACTTGCCT CTTCGTAGTA ATTATCATTG TATGTTCGTT 
CTCTATGAAT TTATAGTCAA GCTTCCTTTT GCTACTACCC TGCTCCTCAA TCAGCGTCAG 
GGAAGCAAGA TCCTCCTCGG CTAG 

 

Protein sequence

MTSALQNLTI FYLLPFGYYV LADDNPVTGA IRSESKEYIG CPWWVFDFLV ESVVCLLLAV 
TATAVFRSAA MNRVATHLSP RVHSVGRAVA PKAWCPPTVL WSGRVVTATS PPFGNGQESI 
IMEQPAAVVV NSEGLIADIL TNVTEAEACR LSQSENCEFV NLGPSMVLSP GMIDVHCHIS 
ELGRDWEGYH TATRAAAAGG ITTLVGMPLN SIPSTTTVDA LEQEIEAALD TTLLADVANL 
KNDAFELKAL LSAGVFGLKA FLSPLPPNAG YESVSPAQLA EAAKICGTYD RPILVHAELM 
SLDVCQERLE DAYRGQSLKS YKAHVQSRPP QWEQNAVQVV CDQTMHCKMH IVHLSEASCL 
EIIAATKKHL EKFAKEQNIS VETCSHYLLF DCDSIPDGET RLKCFPPIRN KANRELLWNT 
GIRGGLISMV TSDHSPCPSK MRNLDTLNVK DAWAGLTSLQ YQLPATWTAS QMRGLDYSLV 
DMARWWSLSP STLPTGMSDI KGKIAIGHQA DFVAWDPQYT GPPNGNSTEY HRWKDSYLGT 
MSLRGRVIVK LPFATTLLLN QRQGSKILLG