Gene PHATRDRAFT_34832 details

Gene Information

• Locus tag: PHATRDRAFT_34832
• ID: 7200232
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 467164
• End bp: 469322
• Gene Length: 2159 bp
• Protein Length: 581 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002179437
• Protein GI: 219117285

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTCCG TATGTAACGC GAATACGGGG AATTTGCGCA ATAAGGCCGA CACAAACTCC 
ACACGTGACA CGTAAACGCC GCACCCATCG GATTGGCTCA CACTTGCGTT TTCCATACTA 
ACAGTGGGCG TCACCATAGG ATGATCATTT GGCTATAACT TTTCTAGAAA GGCGCAAATG 
GCTCTGCTGT CCCTACAGTG GGAAAGGAAT TGATTCGAAC TTTCTAGTAA GTTTTTTTTT 
TAATTTCTGA CTCCTAGGAG AGATTGAGTT ATCATAGTCC AAAAAAATTT GGGCTAGCTC 
GTGACTCGAG TCACGAGTGG ATTTCGACGC CAAATCGTTG AAACACAAAA GTCACCATGG 
CGGACTTGGA TGAAGCTTTC ATTGCTTCAT CAGATGATGA ATCTGATAAA AATTGTAGAG 
TCACAAGGAA ACGTACAATA GAAGATACCG GGACAAAAAT TTCGTCAAAA TTGTCCCGAT 
CGAAGTCTCC AATGAAGTCC AAACGGAAGC AGACTCGGAT GCCAACAACC ATGGTGGCGC 
TAATACCAAT GAAAAGACAA GTTGAATCGC TTCTCCGGGG CTCACACTAC GACCAAAACG 
TTTCGTTACG TGTTATTACA GCCGCCCTCA GGCTTCAAGA GGACTATATT TCCAAAAAAT 
CAAAAAGAAA AGGGGAACCA GTACCACCGC CCAAAGTGCA AAACACTGTG TGTCGTCTGC 
TTGGTGTTTC ACCCAAGAAC TACACCAACA TTGTATCGCA ATACCTCATA GACGGCTCTA 
TTTATCCAAG TAATGCAGGA TGTGACGGGA GGGGTGGAAA TATGGACCGG AAAGAGACTC 
GAATCCCTCG TACGAAAAAT GTTACAATTG CCATCCGTGA ATTTGTTCGT ACGGAGCGGA 
AGAATCGGAA ACGGGTGACT GCTCGGCAGA TATTGGATTT CCTGGCTAGA AAAGGTATCC 
TACGTATACC AGTTGATCAG AGAACAGGAG TTTACGAGAA AACTGAGTTC CGGGCGGCAT 
TACGGAATGT GCAACGGTTT GTACAAAGCC AGGGCTACCG GAGGGGTCGT CGGAACAACA 
TAGCCCCAGA TCCGTCACTG ATCATAAAAC GCCACGAGTA CCTACAAGCA TTCTTTGATA 
ATGAAGCATT GCCAAAAGAG GAAAGGCTCC GCAATGTTTA CATGGATGAG AGTTACATCC 
ATGAGCATTA TAATAGGAGT GATGATAGCC TTTGGGATCC GAGCGACAAC TTGGATATTC 
AATTTGGTAA GTCAAAGCAC AAAGGACGGC GATATTGTTT TGCTGCTGCT ATACAGGGCC 
CAGACCCATT GGTAGACAAC CCCGGAATTG CATCAGAAAT GGCTGGGCTG GTGCCAGGAA 
CAGTGTGGGC CTTCTGCCCC CAGCAGAAGC GTAGCCACCA AGGGGACTAC TACAAAGTTT 
TCAATGGTGA AAACTTTCTG GCCTGGTGGA AAGATCAGCT GCTCCCCAAT TTACACCAGC 
ATTCTCTTAT CCATATGGAT AATGCGGCAT ATCACAAAGT ATATGGGAGT CATGTGCCCA 
AGTGGGGAAA GCTACGGAAG CAGGAGTGCA TTGATTTCCT GTCGTCAAAG GGAATTGAGG 
TTGAGGCAAG ATGCCCTGCT GTTGTGGTCA AAGCCCGGAC AAAAGAGTGG ATCCTTGCCA 
ATGAAAAGTT TGAGTGTGTC AGGTTAGCAG AGGAACAAGG ACATAAAGTT CTTTTCACAC 
CACCATATCA TAGCGATCTT CAGCCAATTG AGTTGACATG GGCTCGGATT AAAGGAAACA 
TTGGCAGACA GTACAGTGTT GGTACAACAC TGGCACTAGT ACATGAGCGA TTGCTTCATG 
AGTTCAAAAA CTTGGAGGAG TCAGGGCATG GTGCCATCCA AGGTATGATC AACAAGTGTG 
TCAGGATCGC AAAAACATTT TATGACGACA TGCCAGAGGA GGAGTTAGCA GAGGAGGCTT 
TAGAAGATGA GGAAGACGAC GATTATGGTG ACTACGAAGC GGGGTTTGAC GAGGGTGTAC 
CGCATGAAAA CACTTTAGAC GAAAGCATAG TCGGAGAAGA GCTAGAGGAT GTAATTTTTG 
CGGCTAACAA AGACGTTGCC ATAGAGAACG AAGACATTGA AGACGTAGTA TCGGTATAA 

 

Protein sequence

MTSVCNANTG NLRNKADTNS TQRRKWLCCP YSGKGIDSNF LSHKETYNRR YRDKNFVKIV 
PIEVSNEVQT EADSDANNHG GANTNEKTTA LRLQEDYISK KSKRKGEPVP PPKVQNTVCR 
LLGVSPKNYT NIVSQYLIDG SIYPSNAGCD GRGGNMDRKE TRIPRTKNVT IAIREFVRTE 
RKNRKRVTAR QILDFLARKG ILRIPVDQRT GVYEKTEFRA ALRNVQRFVQ SQGYRRGRRN 
NIAPDPSLII KRHEYLQAFF DNEALPKEER LRNVYMDESY IHEHYNRSDD SLWDPSDNLD 
IQFDPLVDNP GIASEMAGLV PGTVWAFCPQ QKRSHQGDYY KVFNGENFLA WWKDQLLPNL 
HQHSLIHMDN AAYHKVYGSH VPKWGKLRKQ ECIDFLSSKG IEVEARCPAV VVKARTKEWI 
LANEKFECVR LAEEQGHKVL FTPPYHSDLQ PIELTWARIK GNIGRQYSVG TTLALVHERL 
LHEFKNLEES GHGAIQGMIN KCVRIAKTFY DDMPEEELAE EALEDEEDDD YGDYEAGFDE 
GVPHENTLDE SIVGEELEDV IFAANKDVAI ENEDIEDVVS V