Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34633 |
Symbol | |
ID | 7200060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 13335 |
End bp | 15467 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179342 |
Protein GI | 219117095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA GCATCCCTAA GAGCTGGGGT GAACGTCACT TCCAGCTAAC GGAAGAAACA GAGCGCTACA GAGTTGCACA GGTAGAAGCA TTTATTTTGG AGCACAACCT TGACTCGTCG GTTCAACTTC AACTGACAAC AACTTGCCGA GGCACAAAAG AGGGTTCGCC TACACTGCCA AGCTACCACA ATTGTTTCGA GAATATTTGT GCGTTTTCAG GCTTAATTGG CGACTATCAA ACCTCATGCC TCTTTGATAG GAAGCTCTGC CCACGAAACC CCTATCCTGC CATTCCCGAG ACAATTGCCA TGTATTACCG TTGGAAAGCT GGCAAAAAGG GAGCACTTTT GTACGACAGT AATAAACTTC CAGTGGAAAA CGCAACTGTG AACAAGGTGG CTGGAGCCAC TTATGTGAAG TGTACTGGAG AGTGGAACTC TCCTTCGGGT TTGGAAAAGG CTCGCGCAGC TTTTAGCAAT CTTCATATGT TATACGACAA CCTCAGAGGT GTATACCAAC ACAGTTGTCC CAACTGCTGC CATTTGAACC CAAAATTTTC TGCGAACAAT GTTGACGCAG GAGACGTTGG TATTTGGAAA TCATGCAATA GACATGCAAG TAAGCCACTC CTGATTCCAC ATGGAAATGC TGCTACAGCA AAAGTTTCTG TTGATGCGTT TAACAGTATC AAAGCAATTC TTGAATCGAC GCATGTGGTG AAAGGGAATG TCCAGCTTAA TCCAAGTCAG GTTTGGCAGC TACAACAATA TCTGATTAAT TCAGGTGACT TGTACAATCA ACAGACATAC ACTATTATGA TTGTGGGAAT AAAACTTTTT CTTCGAGCAG AGGAAGTTCT GTCGATGAAA ATGGAAGATT TTGAAATGAT CTATGCAGTC ATCCACGACA ATTCCGTCAG GTCGCTTGCA GTCAAGATCA AAGGGAAGAG TGACTCCAAG CCTGTACTAT TGAAGATTTG GAAAGATGAC GAAAATCCTG AGTTCTGCCC TGTTAGAATT TTATTTTGCT ACTTGAAGGC TACTGGTATT AAAAGTGGAT ATTTATTTCC TTCATGGTTT ACTCTAAAGG CAGGCATACA TGACAAGGGA AACCATGGAC ATTATTGCAA TCATATTAGC TACAATGATT GGCTGAACCG TATGAAGACT GTTCTGTGCA AGACCTTTCC AAAGGATTTC AACTATGATG TTGGCTTTTG TGTTGGCACC CATACTCTTT GTAAGACAGC ATACCTGTTT GCGATCTGGG GAGTTTTGCG TATGTGGACA TCTTCTGATC CGGGAAAACC CCTTTCCGAC ATAACATATG CACAAATTTT GCTGTCGGCC CGGCATGCTT CTGTGGCACA TGCATGCTTG TACGTACAGG ACTCATTCAC CCTCTTTGAC CTTGTGCAGG AGGAGCAATA CCAAGAATCA CAGCGCGTTT CCCCATGGAA GTCTATCCTT ATTGTTCAAA CACAAGCAGC CATTGGCATT GTTGCCCATT CTCGCATAAA TCAACAAGAA ACAGTTGCAA AGCAGGCAGA TTGGTATTTC CAAAAGGAAG TTGTCATGGC CAATGGATTT CCATTCACTA GGTACTATGC CATGGCCTGT CGTGCAAAGC CAAACCTGAA TTTGCAGGAG CAATTTGATG CTCTGATTGG GCATGCTATG GCAAGCAAGG CTGATAGGCT TGAAGCTCGC CGCCTGAACA CACTCATTAT CAGGGATTCC GCAAGGGTGG CATCACTTGG AGTGTCGGTA GACACCATGG CTGGCCCTTC AGTTGCACCG GTTCAGATAA GTCGAAAACG CATCAGGGCT GTCAGTGGTG GTACGGATGA TCTTGCGCGA CACCGTGCCA GCTGTGGCCA ATTGGAGGTT GCTGGTAGCT CAAAGAAAGC TCTCTTTCAG GAGCTGTTTG AAGTGCACAG CATCTTCACA ACTCGACAAA GCAGTCTTGT CGACGGAGCT AGACGCTGGG CCAGGAATCG CAGCAATACT TACTGCATCA TGAAAGATTG CATTGTGAAT TGCTTTGATG GAGATGCGGA ATCCTACTTT TCGAGCCTGC CAACAAAGCT TGCCATCACG AAACACACCT GCACTTGCTC AGATCGAAAG TAA
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Protein sequence | MAKSIPKSWG ERHFQLTEET ERYRVAQVEA FILEHNLDSS VQLQLTTTCR GTKEGSPTLP SYHNCFENIC AFSGLIGDYQ TSCLFDRKLC PRNPYPAIPE TIAMYYRWKA GKKGALLYDS NKLPVENATV NKVAGATYVK CTGEWNSPSG LEKARAAFSN LHMLYDNLRG VYQHSCPNCC HLNPKFSANN VDAGDVGIWK SCNRHASKPL LIPHGNAATA KVSVDAFNSI KAILESTHVV KGNVQLNPSQ VWQLQQYLIN SGDLYNQQTY TIMIVGIKLF LRAEEVLSMK MEDFEMIYAV IHDNSVRSLA VKIKGKSDSK PVLLKIWKDD ENPEFCPVRI LFCYLKATGI KSGYLFPSWF TLKAGIHDKG NHGHYCNHIS YNDWLNRMKT VLCKTFPKDF NYDVGFCVGT HTLCKTAYLF AIWGVLRMWT SSDPGKPLSD ITYAQILLSA RHASVAHACL YVQDSFTLFD LVQEEQYQES QRVSPWKSIL IVQTQAAIGI VAHSRINQQE TVAKQADWYF QKEVVMANGF PFTRYYAMAC RAKPNLNLQE QFDALIGHAM ASKADRLEAR RLNTLIIRDS ARVASLGVSV DTMAGPSVAP VQISRKRIRA VSGGTDDLAR HRASCGQLEV AGSSKKALFQ ELFEVHSIFT TRQSSLVDGA RRWARNRSNT YCIMKDCIVN CFDGDAESYF SSLPTKLAIT KHTCTCSDRK
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