Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34233 |
Symbol | |
ID | 7199715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 88103 |
End bp | 89089 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178701 |
Protein GI | 219115812 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0555228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCCTC ACAAGAAAAA GGGGTCGACC AAGAAAGCCG AGAAAGAAGC GCAGCACTCC ACCGTGGAGG ACCAAGCGAC GACTGATCTG AAGCACAATC CAGTTCTGTC CGCCAACATT TTGACGCGAG CGCAGCTCTC GTCCGTCATC ATCGTGTGCA TTGGTATCGC GCGCGTCTTG CAAGTAGGAG CAGCCGTTTC GATTCGCAGT ACCAATTTTG TCGACGCCGA ATCCACGAAA CCCGCCCAAG CATGCGTCGA ATATTTGGGA GAAGCGGCCT GCCGAGACGA AACCGTCCAA GCCTTGTTGC GTTACAAGTA TCTGTTGGGC ATTCAGCTTG TCATGCTTCT GGTCTGGGTG ACCTTACAGA GTTGGAACAA CGAAGCACTA CTTGCAAAAC TCAACGGACT GCTCATGTTG TCGCCTCTGC TTCCCACCGT CATCGCCTTG CAGTACTGGG CCGAATGGAT CGCTGCGGGT CAAATCTGGC ACCACTCGCT CATGTGTCTC GTACTTCTGG CGCTCGCCGT GCCTGCATCC ACGCAAGAAA TACCCTTCAT CCATCGCGAC GCATCCCGAC CTCGGTACAA AACCCTGCAA TCTCTCGCCT TCGCGACACT GACCATCCTT CACGCGAAAC AGGCGTACGA TTGGTTGTGG CCGTTGCTGC GGCAACCGAC CAAACTGGAC GCGATTCAAA GCATCGTCCG GCTTCCCGCC TCGCACGGTG CCGCACAAGT CGTCACGACA TTTCTGGGAT TGGACAAACT CACAACGACG CTCATCTGCG CACACGCCTG GTGCTACTTT TCTGAACAAC AACAACGGGT AGGTTTGTGG CTGCACCGGA AGCAGTCGGC GGTCGGTCAC GGTGTGCTCG TCGATGCGCC TTCTCAATTT TTGCCTCACA CACTTCCTCG CTTCTCCATT CCTGCCGTTT GGATCTGGAT CTATGTACGT ACTTGCCGTA GACGCTGCTA CTCATGA
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Protein sequence | MAPHKKKGST KKAEKEAQHS TVEDQATTDL KHNPVLSANI LTRAQLSSVI IVCIGIARVL QVGAAVSIRS TNFVDAESTK PAQACVEYLG EAACRDETVQ ALLRYKYLLG IQLVMLLVWV TLQSWNNEAL LAKLNGLLML SPLLPTVIAL QYWAEWIAAG QIWHHSLMCL VLLALAVPAS TQEIPFIHRD ASRPRYKTLQ SLAFATLTIL HAKQAYDWLW PLLRQPTKLD AIQSIVRLPA SHGAAQVVTT FLGLDKLTTT LICAHAWCYF SEQQQRVGLW LHRKQSAVGH GVLVDAPSQF LPHTLPRFSI PAVWIWIYVR TCRRRCYS
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