| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33774 |
|---|
| Symbol | UBA3 |
|---|
| ID | 7198040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 320260 |
|---|
| End bp | 321744 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | ubiquitin-activating enzyme E1, protein 3 |
|---|
| Protein accession | XP_002178207 |
|---|
| Protein GI | 219114823 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAA ACGACCTGGA CAATTTGAAA CCTATGGTAC GTTGCTCGTT CGACTTCAGC
ATCGATATCG ATGCATCATT TAGCGAACGC GCTAAATACA TGTAAGGTTA TTTTCTAACC
GCAATCCCCC AGGAAGTTGA CACTAGAAGA TCGTCTGAAA ATGCTAGGGG TATACGTGGG
TCTCTACTGA CCCTTCTCAG CCGCCCGTCG CCTTTCGGAA ACGAGACTGG ACCATTGGCA
TGTGGCGAGT TTGAACCGCT TCCGAAACTA AGTTCCTGTT ACGCTACTAC AGCTTCTGAC
CATGAATCCC CTTTGACGAA AGCCAAAATT CTCGTCGTCG GTGCTGGAGG GTTGGGTTGT
GAAATTCTCA AGAATCTTGC GATGTCCGGC GTGAGAGATG TGGACGTAAT TGATCTTGAT
TCAATCGACG TGACCAATCT AAATCGTCAG TTCTTATTCC GTCAACGAGA TGTCGGCACA
TCAAAGGCGA AAACCGCAGC TGCTTTCATC AACGAGCGCT GCCCTTGGAT GAGCGTTACA
GCTCACCACG GTATGATTCA GGACAAGGAG CCGTCGTTCT ACTCCTCCTT TGATTGTATC
ATATCGGGAC TCGACAACGT TGAAGCTCGT CGTTGGCTCA ACGCGACTGT GGTCGGACTC
GTAGAGTTCG ATGACGACGG CGATATGGAT CCAGCCTCAA TCATTCCGAT TATTGATGGC
GGAACGGAAG GATTTTCAGG ACAAGCTCGT TTTATCCTGC CGCGTATCAC GAGCTGCTTT
GAGTGTACAA TCGATGCTTT TCCGCCACAA ATTGCTTTTC CGTTATGCAC GATTGCCGAG
ACTCCACGCA AACCGGAACA TTGCATTGCA TACGCGTCAA TTCTTCAATG GCCGAGAGAA
TTTCACGATA AGAAGCTCGA CAGTGATGAT CCGGATGACA TGAAGTGGGT CTACGAAAAG
GCGTTGGAGC GAGCAAAGCA GTACAACATT GACGGGGTTA CATATATGCT AACCATGGGC
GTAGTCAAGA ATATAATTCC TGCCGTTGCG AGTACCAACG CAATCATTGC GGCGGCGTGC
GTGAATGAGG CGATAAAATA CATCACCTTT TGCTCACAGA ATCTCAACTC ATACATGATG
TACATGGGGT CTGAGGGTGT TCATTGTCAC ACGTTTGCAT ACGAGCAAAA AGATGATTGC
CCGGTTTGTA CCTCGACTGT GCAAAAAATG ACAATTTCTA AGACAACTAC GCTGAACGAG
CTATTGCAAG AGTTTCGCGC GGGTCCCTTG CGTCTGAAAT CGCCAAGCCT CGTCAGTTCA
GGCGGAAAGA CGCTTTACAT GCAAAAGCCT CCAGCCCTAG AAAAAGCGAC TCGATCAAAT
TTAGACAAGC CGGTGTCGTC CCTTGTGGAA TCTGGTGAAG AGTTGACTGT AACAGATCCC
CTGCTTGAGA GCATTGCAGT TGGGGTGTCA ATTACGTTTG AATAA
|
|---|
| Protein sequence | MAGNDLDNLK PMEVDTRRSS ENARGIRGSL LTLLSRPSPF GNETGPLACG EFEPLPKLSS
CYATTASDHE SPLTKAKILV VGAGGLGCEI LKNLAMSGVR DVDVIDLDSI DVTNLNRQFL
FRQRDVGTSK AKTAAAFINE RCPWMSVTAH HGMIQDKEPS FYSSFDCIIS GLDNVEARRW
LNATVVGLVE FDDDGDMDPA SIIPIIDGGT EGFSGQARFI LPRITSCFEC TIDAFPPQIA
FPLCTIAETP RKPEHCIAYA SILQWPREFH DKKLDSDDPD DMKWVYEKAL ERAKQYNIDG
VTYMLTMGVV KNIIPAVAST NAIIAAACVN EAIKYITFCS QNLNSYMMYM GSEGVHCHTF
AYEQKDDCPV CTSTVQKMTI SKTTTLNELL QEFRAGPLRL KSPSLVSSGG KTLYMQKPPA
LEKATRSNLD KPVSSLVESG EELTVTDPLL ESIAVGVSIT FE
|
|---|
| |