| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33054 |
|---|
| Symbol | |
|---|
| ID | 7197278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 1414613 |
|---|
| End bp | 1415782 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177825 |
|---|
| Protein GI | 219112147 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.608605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGACT ACCGACCTAG TTTGACCCCC GAGGAACAGC GTAAGTTAGA GTTGCTACGA
CATGCCAGCT ACAACACTGC TCCCCGGGAA AGTACTCGTA TAGAGCGTCT GCCCCCTCCC
CAGCAAGCGA TGATATCGCC GTCGGAACTG AGTCGCCTAA GCCTAGCAAA CATCGAAGCT
CGGATGGCTT CTCAAGGGGC GCTGGCTGCA CGTGTTCAAG CTGCTCAGCA AGCTCATGCC
CAGGCTCAAG TTCAGAATAT GCAGATGATG GGGCGTCCAC AGCTCTCTCC CGCCCTGCTG
TCCAAACATC GACTGGCCTT TCACCCGTCG TCGCCCATAA AGCAAGGCCA GAGGCCGTAT
TCACCGCAAA AGCAAAGTGT CGGTGGCTAT CGTTCTCCAA TGAGACAACC CACCTACTAT
AGATCGCAGA ATGAATTCTC TTCCTTCCCT TCTCCGGCTT CATCATTTCT TTCACCAGTT
GAACACGCGC ACGCATATCC CTCTCCTGCT AGTTTCCCCT CGTCAACTAC TAGCTTTCCT
TCTTCGGCGG GGAGCTTCCC ATCGTCTACG GGAAGAATCA GAAGCCCGGC AGAAGGACTG
AACATGCTTC GAGCAGTAAG CTTGGGAATG CGAGGAGATC GTTCAGAAGG CCTTCCTCCC
ATGTTAGCCC CTCCACTGAC CTCTCATATG GCACCGCCCC AATCACACCC ACCGCCGCGA
CACAATAGCA ATGCGTCAAT GGATGACATG TCAACTTCTA CGATACACCC TTCAGAGGGA
AAGTTGTACA TTGACGAACT GCAACCTTAT GACGTTCTTT GTGGACGAGG TGGAAAGTCG
AACCATCACC CCGGAAAGTA AGTCAGTGTT GCAAATCCAT AGGTGGTTGG ACATGCATCT
CATTTTGTCT AACTCTCATC GCTTTGTGGC TTCAGCAAAC GGTACCGACA CGTCGTCAGC
GAAATGAAAA TGATGTATCG CAAAACAGAA GCAAAAGCGA TCAAAACCGA TCTTAGTCGT
GCTATTGTGG AACATGTATG CAACTATGGA GGACGGTTTA TAAAAAGAGA AGAAAACTCG
GGTCGATACT ATGTACTCAC CAAATCTGAA GCCAGGAAAA AGACCAGCCA AGCTCTGCGG
GAAACCAAGG AATTAAAGTG GACCGCGTAG
|
|---|
| Protein sequence | MMDYRPSLTP EEQRKLELLR HASYNTAPRE STRIERLPPP QQAMISPSEL SRLSLANIEA
RMASQGALAA RVQAAQQAHA QAQVQNMQMM GRPQLSPALL SKHRLAFHPS SPIKQGQRPY
SPQKQSVGGY RSPMRQPTYY RSQNEFSSFP SPASSFLSPV EHAHAYPSPA SFPSSTTSFP
SSAGSFPSST GRIRSPAEGL NMLRAVSLGM RGDRSEGLPP MLAPPLTSHM APPQSHPPPR
HNSNASMDDM STSTIHPSEG KLYIDELQPY DVLCGRGGKS NHHPGNKRYR HVVSEMKMMY
RKTEAKAIKT DLSRAIVEHV CNYGGRFIKR EENSGRYYVL TKSEARKKTS QALRETKELK
WTA
|
|---|
| |