Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32833 |
Symbol | |
ID | 7197468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 904306 |
End bp | 905436 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177714 |
Protein GI | 219111925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.742524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCTT CTCAGTATGT GACCTTGATA AGCTTTAGCC CACATGTTCG GTATCTTTGC CTACTGTCAC TTTCATGGTT GTCTGTCACC AGCCATGGCT TCGCTCTCTC CCACAACACT CTTAAACGGT TTGCACCGAA CAAAGCATTG TGTAGCCCCC CTACACGCCT TGACCTGATA TCTTTGGTCA ATTTTCGTGA TGAAATCACC TTTTTTGATA AAACCGACGA CGAGCGCTGT TGTATAAACC GCCAAGGAGA GTTTCGACCC CAAAAAGGTG ATGTCTTTGA ACTTGCCCTG GCTGAAGAAA CGGACCTTCC TGATGTTTCC CGCTTCATTG TCACTAGTTT TGGCGCCGAC GCAATTCGGG TCAGTCAGGA TATGAGCACA TTCGAAGGAA TGCTCATGCG TCCTGCTGTT GAACTCGTCA ATGGCTATTC CGGTATTGTC GCCTTCGCCG AAGTTTTAGC AGGCCTACGG AGTAGACTAA AAACAAGGAT AGCCAACGGC TCCGACCTTT CATTGCCTGA ACTCAAGGGA CGTTCCCGCA CAGAGCAAAT ATCTGAGGCC ACCAACGACT CTATTGTGTT AGTACTTGGA AGACGGCACG CGGGAAATGA TTGGCACATA GACGTGATTG CTTCGGTCGA GCTAAGATTG CAACTTTGTG ATGCCAAGAT CCCTTTCTCC CTCCCATGGC TGGACCGGAT TGAACGTACT GCCGCCTCAT GGATAGGTCT CGGCAAGAAT CATGCTCGGG ATTTGCAGCC TTACTTAGGA AATCTGTGCG TGGCCGAAAG ATACCGTGGA AGAGGTATAG GCCGAGCGTT GGTACGGTGT GTCGAAGATA TTTCAAAGAC AAAATGGGGC TATAGCCGAA TATATTTACA CGTCGACAAG GACAACGCAG CGGCGTTAAA TTTGTACCAA GAGGAGGGTT ATAGAGATGT GGGCCTTCGT TGGAAACCAT TCTGGGCGGG CAAAGCTGTG GACATCGGAT ATTATGTGAA AGGTTTGAAT AGGAAAGAGA GAAAGGAATA CAAGGCTTCG CTTTCTATAG ATAAGAAAGA GAACAAGAGC GACGCAAATA CTGTGGAAGG AAAATTGAAA AGGAGCGACA TAACTAGGTA A
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Protein sequence | MTASQYVTLI SFSPHVRYLC LLSLSWLSVT SHGFALSHNT LKRFAPNKAL CSPPTRLDLI SLVNFRDEIT FFDKTDDERC CINRQGEFRP QKGDVFELAL AEETDLPDVS RFIVTSFGAD AIRVSQDMST FEGMLMRPAV ELVNGYSGIV AFAEVLAGLR SRLKTRIANG SDLSLPELKG RSRTEQISEA TNDSIVLVLG RRHAGNDWHI DVIASVELRL QLCDAKIPFS LPWLDRIERT AASWIGLGKN HARDLQPYLG NLCVAERYRG RGIGRALVRC VEDISKTKWG YSRIYLHVDK DNAAALNLYQ EEGYRDVGLR WKPFWAGKAV DIGYYVKGLN RKERKEYKAS LSIDKKENKS DANTVEGKLK RSDITR
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