Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32823 |
Symbol | |
ID | 7197462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 874661 |
End bp | 875329 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178025 |
Protein GI | 219112547 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.194414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAT CGAGGCCTTT CCCCTGCGAT GAAGTCATTG CGCGCAAGAA AGAATTACGG AAAGAAATTC GGTCGAAATT GAAAGCTCTT TCTAAGGAGG AAATTCGCGC TCAAAGTGTT AGAGTGTGGG ACCGCCTCTT TGAGCTCCCT CAGTATCGGC AAGCTAGATC CATAGGACTC TTTCTGTCAA TGCCAACAGG CGAGATATCT ACCGAATTAG CGTTAAAGAA TGCATCAGAA AACGAGAAGC AGGTCTACGT TCCACAGGTT GGCAAGAACT TTGAGCAAGC GGACATGGAA CTGATAAAAG TTGTCAAGGA TGATGGAATC AAACAAGGCG AATTGTTTTA TCACTCGTGG CCCCTCAATA AGTGGGGTAT TCCTGAACCT CCTCCGCATA TTCCGCTGAT ACCGGCGGCA CCAGGCGATA TTGATGTGAT TGTGGTTCCT GGTTTAGCTT TCGACGAGAA GGGGAACAGA CTCGGTCAAG GGAAAGGGTA CTATGATCGC TTCATTGCGC GTATGACATT AGGGGAAGGA GTAAGTGCCC CCTTTTTGGT GGCCGTGGGC CTTGAATGTC AGCTCACAGA TCGGGTACCG GTGGAAGAGT ACGACCAACT GATGGATCTT GTCCTTTTGC CTAGTCAAAC GATCGTCATT GAAAAGTAA
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Protein sequence | MSSSRPFPCD EVIARKKELR KEIRSKLKAL SKEEIRAQSV RVWDRLFELP QYRQARSIGL FLSMPTGEIS TELALKNASE NEKQVYVPQV GKNFEQADME LIKVVKDDGI KQGELFYHSW PLNKWGIPEP PPHIPLIPAA PGDIDVIVVP GLAFDEKGNR LGQGKGYYDR FIARMTLGEG VSAPFLVAVG LECQLTDRVP VEEYDQLMDL VLLPSQTIVI EK
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