| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_32772 |
|---|
| Symbol | |
|---|
| ID | 7197576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 772764 |
|---|
| End bp | 773909 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178000 |
|---|
| Protein GI | 219112497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAG CTCCTTCTTT ACGTCGACAT CACTCTACAT TCTCTCCGTT CTCGACAACA
CCAACGTCAT GCCGAGAAGC GCAAGCCCAC GTTTCTACCG AGACCGTTGA CATGCCTCTC
ATGATTGAAT ACGATGAATT TTACGTATCA GACGATGGGA TTGCCCGAAC ATTCTACGAA
CTGCATGCAA CGGGCTCGAC GAAGAAACCA CCCTTTGCAA TTGAAGAGCG GTATGATTTG
AAGCAAGCTA AGAAAACGTT TGTGTTGCGC AAACCTGCAC CAGACGAGAA CTCTCCTCAT
TCATCTAATG AAGATCAGGA CGCTCAACCT GAAGTCTTAA GCCGGAACTC CCTCGGTGCT
GTAGATCTGG GAAAAGTCAT TACTTCCGTG CACATCCAAG AGATTGATCA AGGAGTGTTC
GGTTCCGCCG GCACAGGCGC AACGACATGG GAAGCCTCGC TCGCCATGGC TCTCTACTTT
GGTACGCAGC GGCACCAGCT TTCTGGAAAT GTCGTCGAGC TTGGCTGCGG GGTGGGCGTA
GGCAGCATTC TCAATATCTT GGCATCGACA CTGGATCACC GAGAGCGCTC GCACGTCAAG
TCCGTCACAC TGACTGACGG AAACGATGAA GTTTTGCAAC AATGCCGCAG CAATGTGCAC
CAAGCCTTGG CTGGTGTGCC CCCTAGCACA CGTCCACCTA TTTCCATCAA AAACTTGGAG
TGGAAGGAAG CGTTCGAGTC GCTTGATCGG TGCAGTGACA TTTTGGGTGG TGCGAAGTAC
AAAACAGTGA TTGCCTGTGA CTGTGCTTAC CGCCACCAAG CGATTAAACC CTTGAGCGAA
ACCTTGGCTA GTATACTCCA ACCTGAAGGT ACCATTCACA TGTTTGGACC ATACAATCGC
AGCGCATTTT TAGAGACATG TCGTTACCTG TCCAGGGAGT TGAATTTGGA TGTCACCTTG
GAATGGGTTG AAATCAATCG ATATCGACTC AAGCCAGCCA GTGAAATAGA AGGTAGTGGA
TGGAGTGAAA AAGACGACGG TAGCTTTGCG TCACAATGCG CAGCCAAGTT TCTGCATGTT
ATAGCACATC ACAAGAGGGA TAGCAGTAAT CACAAAGCAG ACGAGTCACT CTTCGATATT
GATTAG
|
|---|
| Protein sequence | MSQAPSLRRH HSTFSPFSTT PTSCREAQAH VSTETVDMPL MIEYDEFYVS DDGIARTFYE
LHATGSTKKP PFAIEERYDL KQAKKTFVLR KPAPDENSPH SSNEDQDAQP EVLSRNSLGA
VDLGKVITSV HIQEIDQGVF GSAGTGATTW EASLAMALYF GTQRHQLSGN VVELGCGVGV
GSILNILAST LDHRERSHVK SVTLTDGNDE VLQQCRSNVH QALAGVPPST RPPISIKNLE
WKEAFESLDR CSDILGGAKY KTVIACDCAY RHQAIKPLSE TLASILQPEG TIHMFGPYNR
SAFLETCRYL SRELNLDVTL EWVEINRYRL KPASEIEGSG WSEKDDGSFA SQCAAKDSSN
HKADESLFDI D
|
|---|
| |