| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_32733 |
|---|
| Symbol | |
|---|
| ID | 7197556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 674322 |
|---|
| End bp | 676082 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177981 |
|---|
| Protein GI | 219112459 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTT TGGTGTTGCT CTCCCTGTTT TATTCGCCGC GTTTGCTCGT TGAGGCATGT
ACAGACATAC TCGTGACACC CGGCGCGTCG GTGGACGGAT CCGCCATTAT AGCCTACAAC
GCGGATTCTC CCACCTTGTA TGGAGTACTG TACCATTATC CACCTTCGAA AAATGCCCCC
GGAACAGAAC GACACGTATA CGACTGGGAT TCCGGTGTGT ATTTGGGAAA AATTGAAGAG
GCAGAAGAAA CATACAATGT GATTGGCAAC AGCAACGAGC ATGGGTTAGT GATTGGAGAG
TCAACGTTTG GCGGTGTTTC CGTGCTAGCG TGGAATCAAA CGGGTGCCAT TATTGACTAC
GGGTCCCTCA TTTACTTGAC CTTGCAAAGA GCAACGACGG CGAGAGCAGC CATTGCCGTG
ATGGTTGATT TAATGGATAC ATACGGGTAC TACTCTGGGG GTGAGTCCTT TTCCCTTATG
GATCGATCGG GCGAAGTCTG GATAATGGAG GTTATCGGTC GAGGCAACGA TTTCGGAAAG
AAGGGAGCTG TTTGGGTCGC ACAAAGAATC CCCGATGGAG CGGTGGCGGC ACACGCAAAT
CAGGCCCGAA TTACAACCTT TCCTCGCAAC GATCCGGATA ATTTTCTATT TGCCGAAGAT
GTAGTTGAAG TCGCAATCTT TTATGGTCTC TTTTCGGCAA GTGCGGATCC GGGAAGCTTC
TCTTTTTCCG ATGTATACGA TCCAATCACT TTCATCGAAG CCAGACAAGG TGAGGCGCGG
GTTTGGTCCA TCTTTTCAGC CATTGCGGAC AAAACCGGTG AATTTCAGCG GAATTATCTC
TCGTATGCAC TCGGAGAAGA GACAGATCAT AGAATGCCGC TGTATATTAT ACCATGCGAA
AAGCTCTCCG TCATGGACGT GATGCATCTC ATGACTTCGC ATTACGAAGA AACGCCGCTC
GACTCTTCAG TAGACGTCGG TAGCGGACTC TTCGAGACGC CGTACCGTCC ACGTCCCCTT
GTGTGGGAAT TCAACGGTAC CAAGTACCAC AACGAACGCA GTATTGCCAC TGCCAAGACA
GGTTGGAGCT TTGTTGCGCA AGCTCGTCCT TGGATGCCGC CAGAGCTGGC GGCTGTATCC
TGGTTTGCCT GTGATGACTC GAGTACGGCT CCGCGGGTGC CCGTTTACGG GTCGAGTAAA
GCTGTTTCCG CAGCATATGC GGGGCAAGGC TCACAGGATG GAGTCTTCTC TCCCTTGCTG
ACATTTGATT TAACCAAGGC CTTTTGGGTT CAAAACATGG TTTCAAACTT TTGCTATTAC
CGTTACAAGG ATGTCTACCC CATGGTGCGC CGTAAGATCA CTTCAATTCA GCGTGAGTTC
AATGAGATGA TGGTGACTGC GGACGAACGC GCCCTCACAC TTTACAATGA GATGGGTCCC
GACAAGGCGA TCGATTTCGT GACGTTGTTC AGCGTGAATG CAGGAAACTC GCTGCATAAA
GAGTGGATGG AATTTTATGG TTATCTTTTT GCCCGCTTCC GAGATTTTTA CACGATTACT
GCAAAAGGGG ACGAGCCTGT TTGTGGCTGC GTGGCACAGG AGCCAGGTCT TTCCGAGTCT
GTGAAAAAGC GGATAGTCGC AGAAACTGGC AACCACTACA AAGTCTTGGA CAATGGCGGT
GATCACCCAG ACGTTGTCAG CGGAGAAAGC CCTCGCCATA AGAGAGATAC GAGCCCAAAA
TATACGACAA TGGAAAGTTG A
|
|---|
| Protein sequence | MASLVLLSLF YSPRLLVEAC TDILVTPGAS VDGSAIIAYN ADSPTLYGVL YHYPPSKNAP
GTERHVYDWD SGVYLGKIEE AEETYNVIGN SNEHGLVIGE STFGGVSVLA WNQTGAIIDY
GSLIYLTLQR ATTARAAIAV MVDLMDTYGY YSGGESFSLM DRSGEVWIME VIGRGNDFGK
KGAVWVAQRI PDGAVAAHAN QARITTFPRN DPDNFLFAED VVEVAIFYGL FSASADPGSF
SFSDVYDPIT FIEARQGEAR VWSIFSAIAD KTGEFQRNYL SYALGEETDH RMPLYIIPCE
KLSVMDVMHL MTSHYEETPL DSSVDVGSGL FETPYRPRPL VWEFNGTKYH NERSIATAKT
GWSFVAQARP WMPPELAAVS WFACDDSSTA PRVPVYGSSK AVSAAYAGQG SQDGVFSPLL
TFDLTKAFWV QNMVSNFCYY RYKDVYPMVR RKITSIQREF NEMMVTADER ALTLYNEMGP
DKAIDFVTLF SVNAGNSLHK EWMEFYGYLF ARFRDFYTIT AKGDEPVCGC VAQEPGLSES
VKKRIVAETG NHYKVLDNGG DHPDVVSGES PRHKRDTSPK YTTMES
|
|---|
| |