Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32554 |
Symbol | |
ID | 7197401 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 234135 |
End bp | 234930 |
Gene Length | 796 bp |
Protein Length | 231 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177889 |
Protein GI | 219112275 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0366945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGTTC AGCATTCGAA TCCTTTCGAC TGCCAATCGG AACTATCAAA AATGAGCTGG GAACTTACAT CAGAGGTCGA GCTACCTTCT CTCTTTTCAT CTGCAACCAA GCTTATCATG AAACTCGCTA TTTTCGATCT CGACTATACC CTTTGGCGTC CGGAGATGTA CCAGCTTAAC GGCCCTCCTC ATCTTACGCC CATTGAAAAA GTCAAAACTC GCAAACTCAA ATTGTCGCCA GCTATGCTGA AAGAGGCAAG GACGAATTTG GAAGACCACG TGCTCGTGGA CCGGCGTGGA AACCTGATGC GGGTATTCGA CGGAGCGTAA GTAAATTTCT CGTCGACATC AATATTTTGC CCATTTGATC GGCCACGAGC TCGATTCTAG CATTCATCCT ATCGTTCACC TTACTTTACT TGATAGAAAT TATGCGCTTG AAGATATCAA AAGAATGGAA ACCGACGGCC ATCCTATTCA AGCTGCCGCC GCATCTCGGA CAGATGAGCC TAGCTGGGCT CGGATATGTA TGCAACATCT CGCCCTCAAT GACGGGACTG TATTAGCCGA AGTGTTTGGA GATTTGGTGG AAATTTCTGG TGGCAGCAAA GTAAAGCATC TACAGCGATT GAGTCATAAG ACCGGCATTC GTTTTGAAGA TATGTGCTTC TTTGACAACG AGCAATGGAA CATTGAAGAT GTTTCGAGAT CGCTGCCAGT CAAATGCTAT TATACACCCA ATGGAATGAC GCGGCAAGCT TGGAAAGATG CTTTAAAGGA TAGTGCCTTA GAGTAG
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Protein sequence | MYVQHSNPFD CQSELSKMSW ELTSEVELPS LFSSATKLIM KLAIFDLDYT LWRPEMYQLN GPPHLTPIEK VKTRKLKLSP AMLKEARTNL EDHVLVDRRG NLMRVFDGAN YALEDIKRME TDGHPIQAAA ASRTDEPSWA RICMQHLALN DGTVLAEVFG DLVEISGGSK VKHLQRLSHK TGIRFEDMCF FDNEQWNIED VSRSLPVKCY YTPNGMTRQA WKDALKDSAL E
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