Gene PHATRDRAFT_32554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32554 
Symbol 
ID7197401 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp234135 
End bp234930 
Gene Length796 bp 
Protein Length231 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177889 
Protein GI219112275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0366945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGTTC AGCATTCGAA TCCTTTCGAC TGCCAATCGG AACTATCAAA AATGAGCTGG 
GAACTTACAT CAGAGGTCGA GCTACCTTCT CTCTTTTCAT CTGCAACCAA GCTTATCATG
AAACTCGCTA TTTTCGATCT CGACTATACC CTTTGGCGTC CGGAGATGTA CCAGCTTAAC
GGCCCTCCTC ATCTTACGCC CATTGAAAAA GTCAAAACTC GCAAACTCAA ATTGTCGCCA
GCTATGCTGA AAGAGGCAAG GACGAATTTG GAAGACCACG TGCTCGTGGA CCGGCGTGGA
AACCTGATGC GGGTATTCGA CGGAGCGTAA GTAAATTTCT CGTCGACATC AATATTTTGC
CCATTTGATC GGCCACGAGC TCGATTCTAG CATTCATCCT ATCGTTCACC TTACTTTACT
TGATAGAAAT TATGCGCTTG AAGATATCAA AAGAATGGAA ACCGACGGCC ATCCTATTCA
AGCTGCCGCC GCATCTCGGA CAGATGAGCC TAGCTGGGCT CGGATATGTA TGCAACATCT
CGCCCTCAAT GACGGGACTG TATTAGCCGA AGTGTTTGGA GATTTGGTGG AAATTTCTGG
TGGCAGCAAA GTAAAGCATC TACAGCGATT GAGTCATAAG ACCGGCATTC GTTTTGAAGA
TATGTGCTTC TTTGACAACG AGCAATGGAA CATTGAAGAT GTTTCGAGAT CGCTGCCAGT
CAAATGCTAT TATACACCCA ATGGAATGAC GCGGCAAGCT TGGAAAGATG CTTTAAAGGA
TAGTGCCTTA GAGTAG
 
Protein sequence
MYVQHSNPFD CQSELSKMSW ELTSEVELPS LFSSATKLIM KLAIFDLDYT LWRPEMYQLN 
GPPHLTPIEK VKTRKLKLSP AMLKEARTNL EDHVLVDRRG NLMRVFDGAN YALEDIKRME
TDGHPIQAAA ASRTDEPSWA RICMQHLALN DGTVLAEVFG DLVEISGGSK VKHLQRLSHK
TGIRFEDMCF FDNEQWNIED VSRSLPVKCY YTPNGMTRQA WKDALKDSAL E