| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_3211 |
|---|
| Symbol | |
|---|
| ID | 7195956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 478317 |
|---|
| End bp | 479386 |
|---|
| Gene Length | 1070 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177095 |
|---|
| Protein GI | 219110687 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.570521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGGG TCTGCACCAA TGTTGGGAAT GCAGTTGCAG CCTTGGTTGC AAATGATGTG
CAGCACACCA AGCTTTGGAA GGCCATGCTG CTGTTGGGTG GACAAGGTTG CTTTTTGCAG
GGATTTTACT GGCAGCTGGT CTTGCCTTCT GACCAAAACA AAAAGAGTAC CAACTGTGAA
GAAGGTGTTG CTTCCATGCA GGAATGCAGC AACAACAATG AGTACAATGA CACTGAGTGG
GAAAGCCGTG CAACACAGTT GTCATGCAAG CAGAAGACAA ACCGCCCTTC CAATGGCAAC
CATGATTGCA AGCTTGCAGA AATGCCCAGT ATCAGTACCA TTGTAGGCCC TATTGTCTTA
ACTTTGACCA GCAGCAATGG AACAATTGAT GCTGTCAGTT GTGTGAAGGG ACAGCCCACT
GTAGCAGTCC TTGTAGGGGC TGGAATTCCT TGTTGA
|
|---|
| Protein sequence | FVTEAVEKIG PSVLRIDTET HLLEEETVGL PPRGPGFVQQ GQGSGLIFSS DGFVLTNAHV
VEDATKVTVT LTDGRMYQAE VKGADEIVDI AVLKILPERS ADGSTLPLKD LPVAELGNSD
KLTVGQIVVA VGSPGGLDNT VTMGIVSGLE RSSHIVGIPH KKVDYIQTDA AINPGNSGGP
LVDVQTGQVV GINAAIRAHM EGTSFAIPIN RVQEIMHDLA EGREVHHGYL GISLASCTPE
WARQNNYKMD AEFGRVPEVY GALVHKVFPR TPAEKGGLRE NDVLLEIGGK RVQSSDDARR
LIDAAPMHQD LDVTLLRENR QISLTVQPVD L
|
|---|
| |