Gene PHATRDRAFT_31939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31939 
Symbol 
ID7196499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1296405 
End bp1297190 
Gene Length786 bp 
Protein Length261 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177262 
Protein GI219111021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.469173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTAT TGACCAGCTT GACGACGCTA CAAATTGCTA TTAAGCTACA CGACAGCAAA 
AAGATTAAAA TCAGCACCCT GGCGAACCTT AGCCGGGGTC AATTTGGCCC TCAGGACATT
GAGGAGATGG AATGGAAAAT CATCATGGCT CTCAACTGGA AGCTTCATCC TCCGACGCAG
TACGCCTTCG TTTCTCATCT TCTTTTGTTT TTACCAGTCG AGACTAATTC TGCAGTTCGC
AAGGATTTGT TAGAATTGTC TCGGTATTTG ACGGAATTGG CAATCTGTGA TTCGTATTTC
GTCGCAGAAA ACAACTCGAC GGTGGCCTTT GCTGCAGTTT TGAACGTTAT GGACGAGATG
AATTATACTC GCCTCTCTGC TGGAACGCGT GAACGCTTTC TTCTGGTGAT TAGGGACAGT
ATTGGTCTGC AACATCGATC CCCACGAGTA GTTGCTGCCA GACAACGTCT CAAAACTATG
TTCTCGGCAT CCTCGGGGCA GAGAGGTGTA CCCTCTTTCG CTTCTCAACA AGAAACAAAC
AACGAGAACG ATTCGAGTTC CATGGCGGGC AATTCAATGT CGTCTGCTGG ATCAAACATT
TCTAGCAACA ATTGTTCCGA CGGCCGATAC GGCCACCGCA CACGAGCGAA CAGTTTTGAC
AGTGTAGGCA GTTGCCGCTA CTCGCCTTCT CCTGCGCATC GTCGATGCGT GCTGACTAGC
GTCTCTCCAT TGGCAGCGTC TCACTCGCGT TTATCCTCCT CACCAATGGT GGCGGGAGTA
CAATGA
 
Protein sequence
MALLTSLTTL QIAIKLHDSK KIKISTLANL SRGQFGPQDI EEMEWKIIMA LNWKLHPPTQ 
YAFVSHLLLF LPVETNSAVR KDLLELSRYL TELAICDSYF VAENNSTVAF AAVLNVMDEM
NYTRLSAGTR ERFLLVIRDS IGLQHRSPRV VAARQRLKTM FSASSGQRGV PSFASQQETN
NENDSSSMAG NSMSSAGSNI SSNNCSDGRY GHRTRANSFD SVGSCRYSPS PAHRRCVLTS
VSPLAASHSR LSSSPMVAGV Q