Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31939 |
Symbol | |
ID | 7196499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1296405 |
End bp | 1297190 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177262 |
Protein GI | 219111021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.469173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTAT TGACCAGCTT GACGACGCTA CAAATTGCTA TTAAGCTACA CGACAGCAAA AAGATTAAAA TCAGCACCCT GGCGAACCTT AGCCGGGGTC AATTTGGCCC TCAGGACATT GAGGAGATGG AATGGAAAAT CATCATGGCT CTCAACTGGA AGCTTCATCC TCCGACGCAG TACGCCTTCG TTTCTCATCT TCTTTTGTTT TTACCAGTCG AGACTAATTC TGCAGTTCGC AAGGATTTGT TAGAATTGTC TCGGTATTTG ACGGAATTGG CAATCTGTGA TTCGTATTTC GTCGCAGAAA ACAACTCGAC GGTGGCCTTT GCTGCAGTTT TGAACGTTAT GGACGAGATG AATTATACTC GCCTCTCTGC TGGAACGCGT GAACGCTTTC TTCTGGTGAT TAGGGACAGT ATTGGTCTGC AACATCGATC CCCACGAGTA GTTGCTGCCA GACAACGTCT CAAAACTATG TTCTCGGCAT CCTCGGGGCA GAGAGGTGTA CCCTCTTTCG CTTCTCAACA AGAAACAAAC AACGAGAACG ATTCGAGTTC CATGGCGGGC AATTCAATGT CGTCTGCTGG ATCAAACATT TCTAGCAACA ATTGTTCCGA CGGCCGATAC GGCCACCGCA CACGAGCGAA CAGTTTTGAC AGTGTAGGCA GTTGCCGCTA CTCGCCTTCT CCTGCGCATC GTCGATGCGT GCTGACTAGC GTCTCTCCAT TGGCAGCGTC TCACTCGCGT TTATCCTCCT CACCAATGGT GGCGGGAGTA CAATGA
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Protein sequence | MALLTSLTTL QIAIKLHDSK KIKISTLANL SRGQFGPQDI EEMEWKIIMA LNWKLHPPTQ YAFVSHLLLF LPVETNSAVR KDLLELSRYL TELAICDSYF VAENNSTVAF AAVLNVMDEM NYTRLSAGTR ERFLLVIRDS IGLQHRSPRV VAARQRLKTM FSASSGQRGV PSFASQQETN NENDSSSMAG NSMSSAGSNI SSNNCSDGRY GHRTRANSFD SVGSCRYSPS PAHRRCVLTS VSPLAASHSR LSSSPMVAGV Q
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