Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31882 |
Symbol | |
ID | 7196165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1167920 |
End bp | 1168750 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176734 |
Protein GI | 219109963 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.340464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTTACT CCGCTTCACT TGTCGTCGCC TCGACCAAGT CAGAGTTGCC TTATCATTTA AATTCTGCCA TAATGAAAGT CTGTCAGGAA GCTTTGGTAC AACGTGGCAC ATTCACAATA GCACTGTCAG GTGGATCCCT GCCGTCGTTT CTATCGTCGG TAAAAGACGT CTTCGAAGCT GCCGGGAATG ATCCGAAGTT TGAGAGTTGG CATATCATTC TAGCGGATGA GCGCTGCGTA CCAAAGTCTC ATCCTGACAG CAACATGGGC GCACTTGAAA ACGACTTTCT CAACCAAGTT TCTGTTCCGT CAGATCAAGT ACATGCCATA AATACGAGAA AGTTGGAAGA ATCTACTGAT GCCGTTGCAT CAGATTATCA AGAACAGATT GAAGAAGTTC TATCAATATC GGGTGGACAG CTGGATCTGG CGGTTCTAGG ATTCGGTCCC GACGGTCACA CTTGTTCATT GTTTCCAAAT CATGTATTGC TCACCGAGCA GAACAAAATG GTTGCCGCAA TCGAAGACTC TCCGAAGCCA CCCCCTCACC GAATCACCTT GACATTGCCA GTTTTGAATA AGCACACTAG ACACGTCATT TTCTGCGGGG CAGGACGTTC GAAGAGTGCT GTTGTGCGGG ATGTATTTAG CGACATTTCT CCGGCTGATG CAAGCTACTC CGTCCAACAC GGAAATCTTT ACAAAGTAAC ATTATCATCT CCAGCGCCAT ATCCATGCGC AATGGTTCGT CCTGATTCCG AACAAACGGA AAATAGTTTG ATGTGGATTG TAGACGCGGA TGCCATGGAA TCAGCCACAG AGCAGAAATA A
|
Protein sequence | MVYSASLVVA STKSELPYHL NSAIMKVCQE ALVQRGTFTI ALSGGSLPSF LSSVKDVFEA AGNDPKFESW HIILADERCV PKSHPDSNMG ALENDFLNQV SVPSDQVHAI NTRKLEESTD AVASDYQEQI EEVLSISGGQ LDLAVLGFGP DGHTCSLFPN HVLLTEQNKM VAAIEDSPKP PPHRITLTLP VLNKHTRHVI FCGAGRSKSA VVRDVFSDIS PADASYSVQH GNLYKVTLSS PAPYPCAMVR PDSEQTENSL MWIVDADAME SATEQK
|
| |