Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31535 |
Symbol | |
ID | 7196076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 307597 |
End bp | 308418 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177065 |
Protein GI | 219110627 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000680275 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGGCCC ATAACGTGTT TACTTCGCTT CAGGAATTGA CAACGCTGGT GTCACAGCAG CAGAAAATTC TCAGTGGCTT GATTGATACC TACTGTAGAA TGTCTGGGAT GGCTGGGCCC CTTGAACAAG AACAGATTGA TGCTATCATT TCAAAAGAGC CAGCTGAGGG AAACGGAAGC TATGTTATCA CTCACAATCA GGTTCGGTCG TGCCTTGATG GGCTCGGCAT GTGGATGATC AAAACAGTCG AAGAATTGGC GTCTGATGAG GAGAAACTTT CTTGTTTGCT GGCCAGCATT GGTAATTTAT TTGTGGTTGC AGCAAATGGC ATTGCCAACA TTGCAATTGT ACGCAGTGGA AACAAATCAC AGGCTGCAGA ACTACCGCCG GTGCTCCCAT ACGAGCTTGC TGCAAGCAAC ATGCGAGATT TTGTCAAGAC AATTCAGAAG CACCGAACAC GATTACAGCG GAAATTTTCA GACGAAGAAA TTGACCAACT TAGTCAAGAG TTTAGCATAT TTCTCCGAGC GTACCGAGAA GAACCCTTGT TCCAAGACGC TTTATTGCAT TCTTATAATC AGAAGAGTAA TTTCTCAGAG AGTCGGGCGG CAACTCATGG ACAATTTCCG CTCGTTCAGA AATTTTGCGG CGGGTTGGCA TCGGCATTTC CAAATACAGC GACAGTTGAG TCTGACTTTT CCGTCATTAA TTGGGAGAAA GACAACACAA GGCAACATCA TACAGACTTC TCGCTCGAAG GCATTTTGCA TTGTAAACAA TACAACAATC TGAAGGACCT CTCGGCTCTA ATTAAGGAGT AA
|
Protein sequence | MEAHNVFTSL QELTTLVSQQ QKILSGLIDT YCRMSGMAGP LEQEQIDAII SKEPAEGNGS YVITHNQVRS CLDGLGMWMI KTVEELASDE EKLSCLLASI GNLFVVAANG IANIAIVRSG NKSQAAELPP VLPYELAASN MRDFVKTIQK HRTRLQRKFS DEEIDQLSQE FSIFLRAYRE EPLFQDALLH SYNQKSNFSE SRAATHGQFP LVQKFCGGLA SAFPNTATVE SDFSVINWEK DNTRQHHTDF SLEGILHCKQ YNNLKDLSAL IKE
|
| |