| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31402 |
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| Symbol | |
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| ID | 7196614 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 11984 |
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| End bp | 14672 |
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| Gene Length | 2689 bp |
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| Protein Length | 853 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176502 |
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| Protein GI | 219109495 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.354429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG GCGTTCCATG CATTCCTCCT GTGCAACCGC CTTTCGATCC AGTTCACGCT
GCCAACGCCA CAGCTCCTCA AATTGTCGAA GCTAACCGTC AGAACGACAA ACGTCAAAAG
CTTTTCGACC TTTACCACAA CGCCATTAAA GCGTTTCGCA ATCAACTCCT TGAAGCCATT
CCCATCGAAT ACATCGAATC TCTCGGTCAT CCTATACGAG GCTTTAGCAA AGTCTCTCCC
CTAGAAATCC TCTCTCATCT CTGGGAAACT TTTGGTAAAA TTCAGGCTTC GGATTTCATT
GCTAACAACG AACGCATGAA AGCCGCCTGG CATCCACCAA CGCCTATTCA GCAGCAGCTT
GAAAAAGGTA ATCAGTTTAT CATTGCGTCT GGCCAAGTCT TGGACGAACG CATCATCGCT
CGCATTGGCT ACCAGATCAT CGAAAAAACC GGGCTCTTTG ATCTTGCTTC TCGCAACTGG
CGTTATAAAG ATGAAGACGA TAAAACTTTG GCAAATTTCA AAAAACATTT CCAGAAGGCC
AACAAGGATC TCGCCCTCAC CGCCACCAGC AGCTCTGCGG GTTATCACAC CGCAAATCAG
AGTACTGTCA CCAAGGGCAA ATTGTATTGC TGGACACACG GCATTGTTCA CAACACGAAG
CACACTAGTG CGACATGTGA AAAACAGGCT ACGGGGCACA AAACCGGCGC TACCTTGCAC
GACAAACAAG GCGGGTCGAC CAAGACCTAT CAATACACGC CACCGGTGCC CAAATAGGAA
AGAGGGACGG CCAAACTGTT CAGTGTGCCA CTGAATACTT ATCATAACAA AAATAAGTCT
TCAGTTGCAC CAAACACTCC TCCGTTAGCT TCCTCCCCGC CATTTTTTCC TCCCGACGCC
ATTGCAGACA CTGGCTGTAC CGGGCATTTT TTGAGCACCA ACATTGCTCA CATACACTGC
CAACCGACAG TCCCCGGCAT CAACGTGGTC CTCCCTGATG GTCGCACAAT CACTTCGAGT
CACATCACCG AACTCAACAT TCCCTCGCTT CCTCCGGCAG CTCGTACCGC CCATATCTTT
CCTGGTCTCT CGAATGGATC CCTCATTTCC ATCGGCCAAC TTTGTGACCA CAGCTGTACC
GCCACCTTCA CATCCGACGC AGTCAGCATT GAGCTCAATA ACACTGTTGT TCTCCGCGGC
GGCCGTTCTC CTTGCACCCG CTTGTGGACC CTAGACTCCC CTGTAACGCC AAATCCGCCC
GCCACTGAAT TGCATGCGCC TTTGAACAAC AAAAATTTTG CGAATCACCT CGGAGACCAC
TCAGGGACCC TTGCCGACCG CATTGCCTTT GTTCATGCAT CCTTATTCTC GCCACAACTT
TCGACATGGT GCAAGGCCAT TGACAAAGGC CGCCTCACAA CCTTTCTGGA CATCACGTCT
GCACAGGTAA AACGGCACCC CCCACAATCA GTCCCTATGG TCAAGGGACA CCTTGACAAG
CAACGGTCCA ACCTGCGCTC AACCAAGCCC AAGGTCACCC TGTCTGCCTC TGTTGATCCT
GATGATATCA ATTTCGACAC CAATTCCGTC GTACAAGACC CTCCAGCCGC CAGGACGCAG
TTTTTGTACG CCGACTTTGC CGAAGTCACC GGAAAATTTT CTTACTGACC CTACCGGCCG
TTTTGTTACC ACTTCAAGCT CCGACAATGC ATACATGCTA GTGGCTTATG ACTACAACAG
CAATTTTATT CATGTTGAAG CCATGAAAAA TCGCACCGGT CCCGAGATCT TGAGCGCCTA
CAAGCGTGCC CACGCCATGC TGTCCTCTAA AGGTTTGCGC CCTCAACTCC AACGCTTAGA
CAACAAAGCC TTGACTGCGT TACAACAATT CATGTCCTCT GTTGACATTG ATTTTCAATT
AGCTCCCCCT CACGTGCACC GTCGGAACGC CGCCGAACGG GCAATCCGCA CGTTCAAAAA
CCACTTCATT GCAGGTTTGT GCAGCACAGA CAAGAACTTT CCGCTTCACC TTTGGGATTG
CTTACTCCCA CAAGCCATCA TGACTCTCAA CCTTCTTCGA GGGTCTCGTA TCAATCCAAA
TCTGTCATCT TGGGTCCAAC TCCACGGCTC GTTCGACTAC AATTGTACCC CTTTGGCTCC
CCCGGGCATC CGCGTACTTG TACACGAAAA ACCGTCAATT CGCAGAACTT GGGCCCCCCA
CGCAGCCGAC AGTTGGTACG TTGGCCCCGC CATGAACCAT TACCGATGCT ATCGCGTCTG
GATCAAAGAG ACCACCAGCA AACGCATTTC GGACACTCTG ACATGGTTTC CCAGCGAAGT
AAAAATGCCC CGCACCTCGT CTCGCGACAC AATTGTCGCA GCTGCTCACA ATCTTGCCCA
TGCTCTGGCA CATCCCTCTC CCGCGTCACC CTTGTCGCCT CTTTCGGTCC AAGAACACGA
AGCCCTATCG CAACTGTCAG ATATTTTTTC GAAAGCCGCT AATCCAGTTG ACTCGTCCCT
CCCCGCCACT CCAGCGACAA CCCTAAGTCC GCCAGCTGCA CCCACCTCCT CACCGCGTCA
AGTCCACTTC CGAGACCCGG TCAATGAATC ACTTCCGAGG GTGCCAACCA CCACAGCCGC
CCCTCCGCAG TCACTTCCGA GGGTGCCTCC CCCGGACTCC GAGGCCTAG
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| Protein sequence | MTDGVPCIPP VQPPFDPVHA ANATAPQIVE ANRQNDKRQK LFDLYHNAIK AFRNQLLEAI
PIEYIESLGH PIRGFSKVSP LEILSHLWET FGKIQASDFI ANNERMKAAW HPPTPIQQQL
EKGNQFIIAS GQVLDERIIA RIGYQIIEKT GLFDLASRNW RYKDEDDKTL ANFKKHFQKA
NKDLALTATS SSAGYHTANQ STVTKGKLYC WTHGIVHNTK HTSATCEKQA TGHKTGATLH
DKQGGSTKTY QYTPPSSVAP NTPPLASSPP FFPPDAIADT GCTGHFLSTN IAHIHCQPTV
PGINVVLPDG RTITSSHITE LNIPSLPPAA RTAHIFPGLS NGSLISIGQL CDHSCTATFT
SDAVSIELNN TVVLRGGRSP CTRLWTLDSP VTPNPPATEL HAPLNNKNFA NHLGDHSGTL
ADRIAFVHAS LFSPQLSTWC KAIDKGRLTT FLDITSAQVK RHPPQSVPMV KGHLDKQRSN
LRSTKPKVTL SASVDPDDIN FDTNSVSPEN FLTDPTGRFV TTSSSDNAYM LVAYDYNSNF
IHVEAMKNRT GPEILSAYKR AHAMLSSKGL RPQLQRLDNK ALTALQQFMS SVDIDFQLAP
PHVHRRNAAE RAIRTFKNHF IAGLCSTDKN FPLHLWDCLL PQAIMTLNLL RGSRINPNLS
SWVQLHGSFD YNCTPLAPPG IRVLVHEKPS IRRTWAPHAA DSWYVGPAMN HYRCYRVWIK
ETTSKRISDT LTWFPSEVKM PRTSSRDTIV AAAHNLAHAL AHPSPASPLS PLSVQEHEAL
SQLSDIFSKA ANPVDSSLPA TPATTLSPPA APTSSPRQVH FRDPVNESLP RVPTTTAAPP
QSLPRVPPPD SEA
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