Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_30967 |
Symbol | |
ID | 7198894 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 364401 |
End bp | 366964 |
Gene Length | 2564 bp |
Protein Length | 539 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185094 |
Protein GI | 219129854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTATGGGTAG GTTTTGTTGC CTGTCTCTCG AGACAAATTG GGTCGCACGC AATCAGGGTT ATTGTGCTTG GGGGTTTCGC AACGTGGAAG TCGAATTCAC CGCCGCGAAG AGGAAAACGG ACAGACGGTG GATGGCTCAT TTTCCATTTT TGTATCGTCC ATTCGGACAG ACCAAGTGAC GGTGCTATGG AGTCCGGAGG CCACGTTGCT CCGTGAATCG ATGTCTGAAG GTGAGTCTCG TACAATAGTG ATTCGAAATG GTTCTGGGCT ATACATAGCG GGGAAAGCTG CCTCCCGCCA GAAATTCGTG GCTCTCGCCC CGGATCGGAC CTGACGTTCT CACCGGAGGA GGAACATCAA CCAACGAAAA ACCGACGGGA GAGGGACGGT GGTAAGCAAA ATCTAGGCGG TATCCGCTTC GGTCGGTGAT ATCTCACCCA AACGAGAGGG GAGAGGGGGG AAGCTTCGTA CTTCCACACT CGTGTCGTCT TTGCATCGAT ACTTTTGACT CGTTCATTCC TTCGTTGTCT ACCGAACGCA CACCCTCGCA AGCTACGACC AACAATGAAG TTCTCTACCT TGACGGCTGC CTTTTTTGTG GCTTCGGCTA CGGCCTTTCA ACAACCGGCC TTTGCGCCGC GCTCGGTCGT TGCCCAGTCG TCGACGTCCG GACTCCACAT GGCGTAAGTT TCCCGACTGT TAGAAAAAAG AATTGCATTG TTTGCGAACC GACGAGAACA CGACGTATAC GATGCGTGTT CACACGTATC ACGGGACGTT GAAGAACTGT ATAGCTCCCT CTACTCATTT TCCATGAGGA ATAAGCTTGC ATCCGGAATC ACTATGTTGC ATTTCTGAGT CCCTTCTCTT ATTGGGTGGT GATTTCATTC CACCCTTTCT GCGTATCTCT CTTGTGGAAG GATGTCCCGA TGGTTCTTGT TTTATGCTTG TTGGCTCACA CGCTCGCCCT TTTATAATCC GTACAGTTTC GAATCCAAGA TTTTTGAAAC TCAAGAAGTC ACCTTTGCCG ACACCAAAGA GATCATTGTC AAGGGAGGTC GGGATCTCTT TCCTTTGTTA CCCAAGGCCT TTGAAGGAAT TGAGAAAATC GGAGTTATCG GATGGGGATC CCAGGCGCCG GCGCAGGCCC AGAATCTGAA AGACTCTTTG AAGGAAGTCG GCGCCGACAT TACCGTCTCC ATTGGTCTAC GCGAAGGATC TTCCAGTTTC GAAGAAGCCA AGGATTGCGG CTTCAGTGAG GAGGACGGTA CCCTCGGAGA AATGTTCAGC GTCATCAAGG AATCCGACTT GGTCGTTCTC CTCATCTCCG ACGCCGCACA AGCCAAGCTG TACAAGGAAA TTTTTGCCGC CATGAAGCCC GGTGCCACGC TCGGCCTCAG TCACGGCTTT CTGCTCGGAC ACTTGGACTC GATCGGAGAA AAGTTCCCCG AGAATATGGA CGTGATTGCC GTCTGCCCCA AGGGAATGGG ACCCTCGGTC CGTCGTCTTT ATGAACAGGG CAAGGACGTG AACGGCGCGG GCATCAACTC CAGTTTTGCC GTCCACCAGG ACGTCAGTGG CAAGGCCACC GAATTGGCTC TGGGTTGGGG CATTGCGCTC GGATCCCCCT TCATGTTCGA AACCAGCCTC CGATCCGAAT ACTGCTCCGA TATTTACGGC GAACGCGGCA TCTTGCTCGG TGCCGTCCAC GGGATCGTCG AGTCCTTGTA CCGCCGCTAC CAACGTCAAG GCATGAGCCC CGAACAAGCA TTTTTGGAAT CGTCCGAATC CATCACCGGT AATATCGTCA AGATCATCTC CACCAAGGGA ATTAAAGCCG TATACGAGTC CCTTGATGGT GACGACAAGG AGACCTTCCA AAAAGCCTAT TCTGCCTCGT ACAAGCCCGC CAAGGAGATT CTGCAAGAAA TCTATGACGA GGTCAGTTCG GGAAACGAAA TCCGCACCGT CATTATGCAC GGCGCCCGTA TCGACAAGTA CCCCGTCGGA AAGATTGACG GCACCGATAC CTGGAAAGTG GGTGAAAAGG TTCGCGCCGA GCGTGACGAA GACAAGATCC CCCTCAACCC CTTCACGGCC GGTGTCTACG TGGCCACAAT GATGGCCCAA ATTGATGTGC TCTTGGAAGA AGGTCACCCG TATTCGGAAG TCGTGAACGA GTCCGTCATT GAGGCCGTCG ATTCCTTATG TCCATACATG CACTACCGAG GAGTGGCCTT TATGGTAGAT AACTGCTCCT TCACGGCCAA GACGGGTAGC CGCAAATGGG CTCCCCGTTT CGACTACATT CTGGACCAGT TGGCGTACAC GGCGGTTGAC AATGGTGCGC CGGTGAACGA GCAATTGATT GCCGACTTTG AAAAGCACTC GGTGCACCAA GCTGTCGAAG AATGCTGTAA GCTTCGACCG GCGGTGGACA TTAGTCTGTT TGCCGAAACC TCGACCAAGG AAATTGTCAT TCAGTAAAAT GGCAATGGAT GCGGTACGCG AAGAGACCTT GAATCCCCCA CCAAATACAA GAATTAAACA ACTTTATTAT ACTC
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Protein sequence | MKFSTLTAAF FVASATAFQQ PAFAPRSVVA QSSTSGLHMA FESKIFETQE VTFADTKEII VKGGRDLFPL LPKAFEGIEK IGVIGWGSQA PAQAQNLKDS LKEVGADITV SIGLREGSSS FEEAKDCGFS EEDGTLGEMF SVIKESDLVV LLISDAAQAK LYKEIFAAMK PGATLGLSHG FLLGHLDSIG EKFPENMDVI AVCPKGMGPS VRRLYEQGKD VNGAGINSSF AVHQDVSGKA TELALGWGIA LGSPFMFETS LRSEYCSDIY GERGILLGAV HGIVESLYRR YQRQGMSPEQ AFLESSESIT GNIVKIISTK GIKAVYESLD GDDKETFQKA YSASYKPAKE ILQEIYDEVS SGNEIRTVIM HGARIDKYPV GKIDGTDTWK VGEKVRAERD EDKIPLNPFT AGVYVATMMA QIDVLLEEGH PYSEVVNESV IEAVDSLCPY MHYRGVAFMV DNCSFTAKTG SRKWAPRFDY ILDQLAYTAV DNGAPVNEQL IADFEKHSVH QAVEECCKLR PAVDISLFAE TSTKEIVIQ
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