| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_30519 |
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| Symbol | PYC1 |
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| ID | 7198165 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | + |
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| Start bp | 404997 |
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| End bp | 409565 |
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| Gene Length | 4569 bp |
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| Protein Length | 1252 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | precursor of carboxylase pyruvate carboxylase |
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| Protein accession | XP_002184364 |
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| Protein GI | 219128321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAGTAGACAG CTGGATGTCG ATGTTCTCTA CGCACAGAGC AAGCCTTTGG ATCAGGACAG
TCGTAGTGTT TTCCACTCTT GACACATTGT CGACTCCATC TCTGCAGTCT TTCGTTTCCT
TCGGTGGTGT CAAGCAAAGT TCCTCGGTTT CCTTTACACA AGGATCGTTC CAGTTGTTGT
TCCCACGGCC CTAGCAAAAA GGATTCTGGA TTGCGGTCGG CCTCATCCCT TGTAACACAG
TACCAGCATC CCAGCACAAT TCCTCGGTTG TAACTGCTGC TGCGGATAGT ATGTATCGAA
CTCGGGTTCT CCGTCGTGCC ACTGCGACGA CTCGTACTCG TGGAGCCGGT AGCGGAAGTC
TTTCCCCGAG TCGTTTTCGG CTGAGTCGTT GGTCAACTAC GTTTGCGGCC CCACCGTTGG
CCTGCGGACT TCTCTCTTGC GCGGCAGGTC TTTCACAGCA GTGCCACCAA CCAATTGGGC
GGGGTTTACA TACGTTCCAT ACTCCCGACG AGCAGCTTCC CAAGAGTGGA GGACCCGTGG
GAGTGGATAC ACCGCCCTTT ACCAAGTTAC TCGCTGCCAA TCGTGGCGAA ATTGCGACCC
GTATCAACCG CGCCGCGGCG GAGCTAGGGA TTTCGACCGC TGGCATTTAT TCTTACGAAG
GTACGTCGAC GCGGAACTCT AGATTCGGCC CGTGGAACCC GTGGGCCTTG TTTTCACATA
GATGTATGTG TATACGTACG TCACAATGCC AGGATATTGC ACACTCCTGA CCCACCGGCA
TTTTCGTTTT GCTATTTTAG ATCGCTTCAC CCAGCACCGC TACAAATGTG ACCAAGCCTT
TGAACTCGAT ACCAGCAAGT CTCCAGTCGC TCAGTACCTA GATATTGACA AGATTGTCGA
TATTTGCGTC AAGAACAAGG TCCAAGCGGT CCATCCTGGG TATGGATTCT TGAGTGAAAA
CGAGACCTTT GCCAAGAAAC TGGACAATGC CGGTATCATT TTTGTTGGGC CGACGGTCCA
GAACCTGCAA GCCTTTGGTG ACAAGACTGC CGCCCGCAAT ATGGCCATTG CCTGCAACGT
CCCGGTCGTG GCGGGCTCGC ACGACGCCTT TGCGACCGCC AAGGAAGCTT CCGCCTGGAT
CAACGATCCC GCCAACCAAT GCGACTATCC CGTCATTGTC AAGGCACTCA TGGGCGGTGG
TGGCCGTGGC ATCCGTATTG TGCCCACGGA GAAAGATCTC AACGCCATGT TTCAGCAAGC
CTCCAACGAG GCCGCCAGTG CGTTCGGCGA TGGTCGCTGT TTTGTCGAAA AGTATGTCGA
AAAACCGCGG CATGTGGAAG TTCAGTGTCT CGGAGATGGT ACGGGTAACG TCATTCATTT
GTGGGATCGT GATTGCTCTG TACAGCGCCG GCATCAAAAG GTCGTTGAAC TGGCACCCGC
CGAGGGTTTG TCGGAAGACG GACGTAACCA AATTTTGAAC GATGCCGTGC GTTTGTTGCA
GAATGCCAAC TATCGCAACG CTGGGACGGT GGAATTTTTG GTCGACAAGA ACGGCAAGCA
TTATTTTATG GGTATGTCAC GTTAAAGTGC AGGGAAGGCA TCCAATATTT GGTTTTTTGC
TATTTTTTAC TTGAGCAGAG CCAATCTCAC ACTTTCCGAT GGACGACTTG GTCTTGCAGA
GGTAAACCCA CGTGTACAGG TGGAACACAC AGTGACAGAG GAAATTACTG GCGTTGATAT
TGTACAGTCT CAAATCTTGA TAGCCTCGGG TAAGACGCTT CCTGAGCTTA ACTTGACGCA
AGAAAGCATT CCATCGCCCA TGGGTGTCGC CATGCAATGT CGTGTAACGA CTGAGGATCC
TGCGCAGGAC TTTCGCCCCG ATACAGGAAC CATCAATGTT TTTCGTATGC CAGCCGGTAT
GGGTATTCGC TTAGACGATG GTCCCGGCTT TCCCGGTGCC CGAATTACAC CTCACTACGA
TTCGTTGCTC GTCAAAATCA CTGCCAAGGC TCGCAACCGC AAGGAAGCTG CTGCCAAATT
GATCCGGGCC CTTAAAGAAT TCCGAGTTCG TGGAGTGAAG ACGAATAAGA GTTTTTTGTT
GAATGTTTTG AAACATCCAG ATTTCTTGGA AGGAGTAGTT GACACGGGAT TTATTGCTGC
AAACCCGCAT TTGCTGGCGC CATTGCGGGA GCAGGACCGC GCTCAAAAGC TGTTGTATTA
CATCGCAAAT GTTGTTGTGA ATGGTACGCC GAAGGAGCTT GGTGCCACTG GCGCGCCACC
ATCAACGGTA GATCCTATCA TACCCGTAGT CGAACCGAAT TCTGGTCAGC AAAAGAAACC
ATCTCTGAAA AAGATTTTTG ATGCAGATGG ACCTGATGCT TTTGCCAAGG CCGTTCGAAA
TAACAAGGGA TTGCTAATTA CGGATACTAC CTGGCGTGAC GCACACCAAT CCCTTTTAGC
TACCCGCTTG CGCACGAAAG ATATGCTCAA TATTGCCCCT GCAACGACGG TTGCTCTAGC
GAACGCGTAT TCGCTGGAAT GCTGGGGTGG AGCCACATTC GATGTTTCGT TACGCTTCTT
ACGCGAGTGT CCGTGGGAAC GATTGTCAGC GTTGCGCGAG GCTGTGCCAG ACATTCCGTT
TCAAATGCTT CTTCGCGGCG CCAACGCTGT AGGATACACA AGCTATCCAG ACAATGTGGT
ATATGAATTC TGCCAGATGG CGAAAGACAC TGGCATGGAC GTGTTTCGTA TATTTGATTC
TGTAAACTAC ATTGAGAACA TGAAGGTACG GCACGATCTC TCTCTTTTTA CATATTACGG
CGTTTCCCCT CTCACAACTT TGCTATAGCT TGGTATTGAT GCTGTTGGAG CTGCTGGCGG
TATCGTCGAG GCAGCCGTAT GCTACACTGG TGATGTCTCC AATCCGAATC GCGGCATGTA
CAATCTGGAA TACTACCTTG GCTTTGTCCG TCAGCTCCAT GGGCTAGGCA TTCATGTTTT
AGCCATCAAA GACATGGCTG GCTTGCTCAA GCCTGAAGCA GGAACAATGC TGGTAAACGC
GATTCGACAA GAGTTTCCAG ATTTGCCGAT CCATGTTCAT ACACACGATA CTGCTGGAAC
AGGGGTCGCG TCAATGTTGG CTTGCGCCAA GGCTGGAGCC GATGCTGTCG ACGCCGCAGC
GGACGCCATG TCTGGAACCA CTTCTCAGCC TTCTCTTGGA GCTCTCGTTG CGAGTACGCA
GGGAACCCAG TGGGACACTG GATTGGATCT GAATCAAGTT CAAGCTGTAA ATGACTACTG
GGAAGAAGCC CGGGGATTGT ACGCTCCGTT CGAATCTGGT CAGAAAACTG GTTCAAGCGA
TGTTTACGAA CACGAAATGC CCGGTGGACA GTATACTAAC CTTTTGTTTC AGAGCTCGCA
GCTTGGGCTA ACAGGGCAGT GGTCAAAAGT GAAGAAAGCC TATGCTGCTG CAAATCGACT
GTTGGGCGAC ATTATTAAGG TGACTTCTCT CGATTGCGTG CGTTACTTGA AAGCTGTTAG
TTTTGGACTC ACATGTTGAT GTTGTTTCCA GGTGACACCG TCTTCTAAAG TAACCGGAGA
TCTGGCTCAG TTTCTTGTCG CCAATGACCT GACCGAGAAA GAGGTAATTG AAAAGGCTGA
AACTCTTTCG TTCCCCAAAT CTGTTGTTGA GTACTTCCAG GGTTACCTGG GTATTCCACC
ATTTGGATTT CCGGAACCAT TGCGCACGAA AGTTCTCAAG GGGCAGACAA TCGAAGGCTA
TGAAGGTTTG ACTTGCTTTG AGGGACGTCC TGGTGCGGAC TTGAAACCCA TGGACATGGA
AGCTGTGCGG TCAAAACTCG AGGAGAAATG GGGAGGCCAG GCTGACCATG GTGTACGTAA
CGTTGACATA CTCAGTCATG CTATGTATCC CGCAGTGTTT GACGAGTACA AAGAGTTTAA
GAATGTATTC GGCAAGCTCG ACTTTCTGGA TACCCGTACG TTCTTGACAG GAATGCGGGT
TAATCAGGAA CTACGAGTAG AAATTGAACC AGGCAAGCAA CTAGTGATCA AACTGGACTC
GGTCTCGGAA CCGGACAAGG ACGGCTTGGT AACGTTACAA TTCGAGCTGA ACGGTACCCT
CCGTACCGTC CAAATCCAGG ACAAGTCGGT GGACTCTGAA AAGGCCGTCC GGCCGAAAGC
GATGGCCGCA GTTGCCGGTA GCGTTGGAGC TCCTATGCCG GGAGTTGTTG TGGAAACCAA
AGTGAAGAAA GGCGATGTCG TCGAGCAAGG AGATCCATTA CTCAGTTTGA GCGCCATGAA
AATGGAGACC ACGGTGTCGG CCCCAGTGAG TGGCACTGTC GTCTTTTTCG AAGTCACCGC
TGGAGACCAA GTCGAAGCCG GAGACCTGTT GGTCGAAATT GAGGACGAGT AAGGTGCTGG
TAGGAAAAGC TGCAATATAA AGGTAGTGGA CGGCACGAAA GGCGGTACAT AAAATTTGTA
GGCTCGCGAA CCGACGTAGG AAGGCAGCTC CATTCAACTA ATATAATAAA ATTTACATTT
ACTGCGACC
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| Protein sequence | MYRTRVLRRA TATTRTRGAG SGSLSPSRFR LSRWSTTFAA PPLACGLLSC AAGLSQQCHQ
PIGRGLHTFH TPDEQLPKSG GPVGVDTPPF TKLLAANRGE IATRINRAAA ELGISTAGIY
SYEDRFTQHR YKCDQAFELD TSKSPVAQYL DIDKIVDICV KNKVQAVHPG YGFLSENETF
AKKLDNAGII FVGPTVQNLQ AFGDKTAARN MAIACNVPVV AGSHDAFATA KEASAWINDP
ANQCDYPVIV KALMGGGGRG IRIVPTEKDL NAMFQQASNE AASAFGDGRC FVEKYVEKPR
HVEVQCLGDG TGNVIHLWDR DCSVQRRHQK VVELAPAEGL SEDGRNQILN DAVRLLQNAN
YRNAGTVEFL VDKNGKHYFM EVNPRVQVEH TVTEEITGVD IVQSQILIAS GKTLPELNLT
QESIPSPMGV AMQCRVTTED PAQDFRPDTG TINVFRMPAG MGIRLDDGPG FPGARITPHY
DSLLVKITAK ARNRKEAAAK LIRALKEFRV RGVKTNKSFL LNVLKHPDFL EGVVDTGFIA
ANPHLLAPLR EQDRAQKLLY YIANVVVNGT PKELGATGAP PSTVDPIIPV VEPNSGQQKK
PSLKKIFDAD GPDAFAKAVR NNKGLLITDT TWRDAHQSLL ATRLRTKDML NIAPATTVAL
ANAYSLECWG GATFDVSLRF LRECPWERLS ALREAVPDIP FQMLLRGANA VGYTSYPDNV
VYEFCQMAKD TGMDVFRIFD SVNYIENMKL GIDAVGAAGG IVEAAVCYTG DVSNPNRGMY
NLEYYLGFVR QLHGLGIHVL AIKDMAGLLK PEAGTMLVNA IRQEFPDLPI HVHTHDTAGT
GVASMLACAK AGADAVDAAA DAMSGTTSQP SLGALVASTQ GTQWDTGLDL NQVQAVNDYW
EEARGLYAPF ESGQKTGSSD VYEHEMPGGQ YTNLLFQSSQ LGLTGQWSKV KKAYAAANRL
LGDIIKVTPS SKVTGDLAQF LVANDLTEKE VIEKAETLSF PKSVVEYFQG YLGIPPFGFP
EPLRTKVLKG QTIEGYEGLT CFEGRPGADL KPMDMEAVRS KLEEKWGGQA DHGVRNVDIL
SHAMYPAVFD EYKEFKNVFG KLDFLDTRTF LTGMRVNQEL RVEIEPGKQL VIKLDSVSEP
DKDGLVTLQF ELNGTLRTVQ IQDKSVDSEK AVRPKAMAAV AGSVGAPMPG VVVETKVKKG
DVVEQGDPLL SLSAMKMETT VSAPVSGTVV FFEVTAGDQV EAGDLLVEIE DE
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