Gene PHATRDRAFT_30031 details

Gene Information

• Locus tag: PHATRDRAFT_30031
• Symbol: Lhcf9
• ID: 7195396
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 265567
• End bp: 266255
• Gene Length: 689 bp
• Protein Length: 205 aa
• GC content: 52%
• Product: protein fucoxanthin chlorophyll a/c protein
• Protein accession: XP_002183709
• Protein GI: 219126950

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCGATCTTTC CGCAACCTTT ATCACCATGA AGCTCGCTCT TTTCGCTACT TTTGTCGCCG 
GTGCCGCCGC CTTCGCTGCT AAGAAAGGCG CCAAAAAGCG TGCTGCCGTT GTCACCGGAA 
ATTTCGAGGA AGACATTGGA GCCACGCTCC CTCTTGGATT TTGGGATCCT TTGGGTCTGG 
TCGCCGACGG CAACCAGGAA AAGTTTGACC GTCTCCGTCT TGTTGAATTG AAGCACGGAC 
GTATTTCGAT GCTTGCCGTT GTTGGGTACC TTATCCAAGA AGCCGGTGTC CGTCTTCCGG 
GAAACATTGA CTTGAGTGGC ACCAAGTTCT CCGACATCCC CAACGGATAC GCCGCCATTG 
AGGCCATCCC ATATGCTGGT AAGCTCCAGC TGCTCGCTTT CATTGGTGCT TTGGAAGTTT 
TCGTCATGCG TGACTTTGTT GGAGGCGAAT TCCCTGGTGA CTTGCGTAAC AACTACATTG 
ACTTTGGCTG GGATTCCTTC GATGATGCCA CCAAAGCCCG TAAGCGCACC ATCGAACTCA 
ACCAAGGACG CGCCGCCCAG ATGGGTATCC TTGCCCTTAT GGTCCACGAG CAACTTGGAG 
TTTCCATTAT TCCCTCCACT GCTGCCTCCG AATACGCATT CTAAGTATAG TACTTGCTTT 
TGGTATCAAT ACCTAACGAT GTTTAGACG 

 

Protein sequence

MKLALFATFV AGAAAFAAKK GAKKRAAVVT GNFEEDIGAT LPLGFWDPLG LVADGNQEKF 
DRLRLVELKH GRISMLAVVG YLIQEAGVRL PGNIDLSGTK FSDIPNGYAA IEAIPYAGKL 
QLLAFIGALE VFVMRDFVGG EFPGDLRNNY IDFGWDSFDD ATKARKRTIE LNQGRAAQMG 
ILALMVHEQL GVSIIPSTAA SEYAF