Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_29824 |
Symbol | |
ID | 7195006 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 136354 |
End bp | 142650 |
Gene Length | 6297 bp |
Protein Length | 1177 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183300 |
Protein GI | 219126095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.981906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCAGCAGTCC AACATTAACA ACGAATTACG AGTAGTGCTG TAGCAGCGTC TCCTTTTTTT CGGTTCGTGC CAAGTTTACT ACATTTAGTC TCAGTTGGTG ACATTGCTGA GTATTCGTTC GTTACCATGT CGGCACTTCC TCCCAATCTC GACTTTGCGG CGACCGAGGT CGAAATTTGC GCAAAATGGA AACAGGAAAG CACGTTTCAA ACCCAGGACA AGCTCAGTTT GGACCGCGGT GATGAGGTGC GTGGGAGTGC GTAGAGCGGA CCCATTGACT CTGAATGAGA TCTATTGTCG CTCGCAAGTA CTCGTATGGT ACTTTCGTGC GTGCGTGATA CTGACACACT GTGTATTTTT GTTTTTGTTC GCGTACGGGT ACAGGAATTT ACGTTTTACG ACGGACCTCC GTTCGCCACG GGTCTACCCC ATTACGGCCA CATTCTGGCC GGTACCATCA AAGACACGGT CACGCGGTAC GCCGCCATGT CGGGCAAGCA CGTTTCCCGC CGGGCCGGAT GGGACTGTCA CGGACTGCCC GTCGAGTACG AGATTGACCA AAAACTCAAC ATTACCCACC GCGATCAAGT TTTGGAAATG GGCATTGACA AGTACAACGC CACGTGCCGA TCAATCGTCA CGCGATACAC GGCGGAATGG GAAAGTACCG TCACCCGACT CGGTCGCTGG ATTGATTTCG AAAACGATTA CAAGACCATG GATCCGTCCT TTATGGAAAG CGTTTGGTGG GTCTTTCGCC AATTGTTCGA TAAGAATCTC GTTTACCAAG GGTACAAGGT CATGCCCTAC TCAACGGCCT GTACAACCCC GCTCAGTAAC TTTGAAGCTG GTTTGAACTA CAAGGACGTC AAAGATCCGG CCGTGGTGGT GAGCTTCCCC ATACTGGGCG AACCACAGGA AGTCTCCTTC GTCGCGTGGA CCACCACCCC CTGGACCTTG CCGTCCAACT TGGCGCTCTG CGTCAACCCC GCCATGGAAT ACGTACAAAT CCTCGACAAG GCGACCAACC ACAGCTTTAT TCTCGCCAAA AGTAGACTGG CGCAACTGTA CCCCATCATG AACAACAAGA AAAAGTGGAA GCCCGAAAAA GCCGCCGAGT TGTACGAACT CCAAGCGACA ATGCCGGGTA CGGCGCTGGT CGGGAAACGC TACCAGCCGC TTTTTGACTT TTTCCAGGGA GAGCCGGGAT CGGAAAACTA CTGGCAGGTC GTGTCGGACT CCTACGTGAC GGACGATGCC GGTACCGGCG TGGTCCACCA GGCACCGGCC TTTGGAGAAG ACGATTACCG TGTCTGTCTC GCCCACGGCA TTATCGCCAA GGGAGGCGAA GTTCCCTGCC CGGTCGATGC CGACGGCAAC TTTGTCGATC TGATTGCACC CGTCAAGGGC ATGCACGTCA AGGCTGCCGA CGAGATTCTT ATTCAGCTCG TCAAGGACAG TGGCCGTCTG GTACAGAAGG ATGTCTTGCT GCATTCGTAT CCCTTTTGTT GGCGTTCGGA TACCCCCTTG ATCTACAAGG CGGTACCCTC GTGGTTCGTC AAGGTGGAAG AGATCCGCGA CCGCATCGTG GAGAACAACA AGCAAACACA CTGGGTGCCC AAAGAGGTTA AGGAAGGACG TTTCCACAAC TGGTTGTCCG ACGCCCGTGA TTGGGCCGTG TCGCGGAATC GGTTCTGGGG AACACCCATA CCTATTTGGG CCAACGACGA CCTCTCCGAA GTAGTTTGTA TTGGCAGTGT TGATGAGTTG GCGGAACTAT CCGGTGTTCG GGTGGAAGAT CTCCACCGCG AAACGGTGGA TCAGATCACC ATCCCGTCCC AGAAGACCCC GGGCGGCGTC CTGCGTCGCG TCGACGAGGT GTTTGATTGC TGGTTCGAAT CGGGATCCAT GCCGTACGCA CAGAGCCACT ACCCATTCGA AAATAAGGAG GGATGGGAAA AGGGGTTTCC TGCGGATTTC ATTGCGGAAG GCTTGGATCA AACGCGAGGT TGGTTCTACA CATTGATGGT CTTGTCCACG GCTTTGTTCG ACAAGCCCGC GTTCAAAAAC AATATCGTTA ATGGTATGGT GTTGGCATCC GACGGCCAGA AAATGTCCAA GCGCAAAAAG AACTATCCCG ACCCGAACAT TGTAATCAGC AAATACGGTG CGGATGCCCT CCGTATGTAT CTGGTCAACT CCCCTGTGGT ACGTGCTGAG TCGCTCAAGT TCAAGGAAGA AGGCGTCCTG GGAGTCGTCA AGGAGGTCTT TCTTCCGCTC TACAATGCCT TCCGCTTCTT TTTACAAAAT ATTGAACGGT GGGAACTTGA AGGCAGCAGC AAATTCGTGC CCGATCTTGA CAAGGTTCGC CAGACGGCGA ACCCCACCGA TATTTGGATT CAGGCCGAGA CTCAGGGTCT TATTAAATTC GTTCACGAAG AAATGGGCGC GTACCGACTG TACACCGTCA TGCCCGCTCT GGTATCGTTT GGCACACAGT TAACTAACTG GTACGTGCGT TTGAATCGGG ATCGTCTCAA AGGAGCCGAA GGAGAAGGTC AGGAAGCCGA TATCGAGGCT GAAACTGGTC TGCAGGTCCT CTACGATGTA CTTCTGAACG TGTCCATGAT TATGGCTCCT TTCACCCCGT TTATTACCGA GTTCTTTTAT CAACATTTGA GAAAATTCCA GCCTTCCTAT CTAGACGCTA CCAACGGAGG GGGCACCTCG AATCCGCCGA TGCCTGGAAA GAGTGACTCG GTCCACTTCT TGCGACTTCC TACTTATGAT GAAACTCGGT TGAACAAACA GGTCGTGGAA GCCATGGAAG CTTTGCAGAG TGTGGTAGAA CAAGGGAGAA ACGCTCGGGA AAAACGGAAC ATTAATCTAC GCACCCCCAT TAAAACTATT GTTGCCATTC TTCGGAATCC AGCAGATTAC GTTGTTGCTG GCATCACTGG CCCGCTAAAG CGATACATCT TAAGCGAACT TAACGTCTGG GATTTCAAGG TTGTCCCGGC AGAGGAAGAA CATGATTGGG TGACTCTAGC TTTAACACCT GATTTCAAAG TTCTCGGCAA AAAGCTTGGT AGCAAGATGA AAGCTGTGTC TGCAGCGGTC AAGGGCTTGT CACATGAACA AGCTGTAAAA TGCCTCGAAG ACGGAAAACT CGAGATTGAA AGAGTCGCAT TGGATACTGC AACAGAACTC GTTTCAAAAC TCACATTTTC TCGCGAGGGA GAACATTGGG AAGCCACGGA AAAGCCGGAC GGATCTTTGG TGGTTGCGAT CGACTGCACA CAGGATGAAG CAATTTTGTC GGCGGGAAGG TCGCGGGAGC TGATGAATGC TATTCAGCAG CTTCGAAAGA ATGCCGGCCT CGATCTCAAG GATGTTGTTG AGACTTTCTT TCGTGAAGAG GAAGGTGTGA CACTCGTGGA AGAAACGGTA GCTCGTAACG TTCCACTTTT CGAAGCAAAA TTCAAAGGTG CCGTTCCTCT GCCTTACCGT TTTGTGCCCA AGTGGGCGGT GGTCTTAAAG AACGAGACAG TGGACGTGGG AGGGACGAAA GTTGATGTGT TTATTTTCAG ACCGGCAGTA GCTGTTAAGG AATCTCTGGG TCCTTCAGTT GAGAGCGTGC TCTCAACACT GGAGCCCTCT AGTCTGCCGA AAGGTGGAAA GTTTAGCTTT TCCCTCGACG GAGTCTCAAC AACGTTGACC GAAGGAACTG ACTTCTGGCT GTCTACAACG GATAAGGTCC GATATACCAA AGTCTTGGCT TGGTTGAAAG TATCATAGTC GTCTCTAAGC TTAGCAATAG TACTTTTGAG TTATACAAGT TGGCGGCTTT TCACGTATCG CCAGAGCTAA CAGTGGAATA AAAGCGCTTG ACTGACTCAC TAAGCCGTCG CAGACTCTCG GCATTCCCTT CTCTTTCCCT CAGTAACCGA TCGATTGCCT CGGCCCTACG ATTCTCTGAT CGTTCTAGAG CAACAGCGAG CGACATGACG TGTGACCGAA GACTACCAAC GTCATTGGAG TGGCCTTGTG AGTTTGATGC TTCCAACGAT TCTGCAGCGC CATTTCGCTG GGCCACCTTT GTTTGCCTCA AGTGCTTGTT CAGATGATCA ACTTCTTCTT CCTTGGTTAC CAGGCGCGCT CTGGTTGACT CGAGAGCACT CTCAAGTGAC TCAACCTGAT GCCTCAGGTT CTCCATTTCG GACTCGTGTA TAGAGCCTTC GAATTCGCGC AGGTGCAACG ATTCAGCTGT TGCAAGAGAT TCCAAATGCG TCTGTTGAAA AATCTCTAGC TTGGCCTGGC TGGCTTGGAG CTCAAACTCA AGGCTGGACA CATTTTCCTT GTAGGACTCA ATCTTTTGCT CCGTTACGGA ACGCTCCAGA AGCAGATCGT TCAACCTCTG TTCGTAGCCC TCAACTGTTG CTGATAATTC AAGCGGTAAT GTCGATTCAA TACCATGTTC AGAGGGCTGC TCAATTGCTC TATTTGAGGC TTTGGCGGTG TCGAGTTGCT CACGTGACAA CTCAAGTTCT TTTCTGGTGT TTTGAAGCAT CTCTTCCAAT TCCTCTACAC GCTTATAGTG CTCGATACAT GCACGCTCTC TGGTCAAAAG TTTCTGTTTT ACACCTTCAA ATTCACTGGT GAAAGATGCT CTGTCAGTAT CAAACTGCAC TCCCAGCTCG TGAAGTTCTT CGTTCTTTGA GATCAATTCT TGATATACTC TCTGATATTC TTCATCTTGT TGAGTAGAGC GAATTCGAAG TTCCTCAGCT TCCTTTCGGT TTTGAACGAA ATCTTTTAGT TGTTCCTTAA GACTTACAAT TTCGGAAGAC TGAGCCATTG TCGCGTTCCG GAGCTCATTG CATTCAGTCT GAAGCTGCGT ACTAGAAGAA GATTTCTCCT GACCAGAGTA AGACGCAATC AAGTCTTCGT GTGCCACCTC AAGCTCCCGA ATTCGGGACA CTAACTCTCT GCGCTCTTCA CCGGCCTCCG CTATACTGAT TTCCAAGAAA TCCCGCGCTC TCGACAACTC AACATTACTT TTCAGCAGCT CTTGGTGCTT TTCCTGCATT GTAACCATTT TTGATGATAC CACATTGTCC GATCCTTTGA GAATCTCAAT TTCCTCTTGT AGCAGTTGCA CTTGTTCGTC GCCCTCATCC AGCTTCTCCT TCAACAACCC AAACTGCACA AGCATCTCTT CGTTCTCTTC AGCAAGAAGG TCCCGTTCTT TGCTGACTTC TTTCAAATTC GATTGATTAA CTTGGAGCTC ATGCTCGATA GAGTTCAATG CCCCTAGCTT ATCCGAAAGT AAACTGTTCT TTTCTTGAAG ACGCTCCAGA TCCTGCGACA AGCGATTTGA CGTTTCCAAG GCTTGCCCTT CGGCTTCCAG AATTGCAGCT TTGGATCGAT CTTCGACTTT TTGAAGTTCA CTCGACAATG TGACGTTATG TTGATCCAAG GCATCACACT TCAGCCGAAG GCTGGACAAT TCCTTATTTT GTCGAGACAT CGCTTCCTCC CATTGCCTCT TTGAATCTTC GAAAAATATC TTTGCCTCGA TCGCCGCTCT CTTCATGTCC TCCTTTTCCG AATTAAGAGC TTCTTTCTGG CTGACGGCGT TCTGGGCAAG ATTCTGCGCT TTCGCAAGCT CGGCTTTCAC CTTGCTGATC GTTTTGGCAT CGCGCAAACT CTGGGCAGAA TCTTCCAAAA GCTGCCGCTC GGCATTCGAC AACTTCAACA ATGCTTCTTG AAGAGAGTGC TCAGATTCTT CTAGCTTGGT AGCAAGCGTC GTTAGCTCGT TGTGTAGCTG CTGATTTTTA TGAGTGGCTT CAGCTGTTTC AGCCTTTTGA GCAGCTGCCA TGGTGTTCAT ATTTTCGATC TGAGATTCCA AAGACGCCGA GAGTGCTTGA GATGCAAGTA GTTCTTTGCT GTAATCCTCT TTCTCCTGGC GAAGAATTTC AATTGCATTC AATTTTTCAA CTACAGCGAC CTTCTCTGCC GCCAGCGCCT CCTTCGCGCG CTCGACCTCG ATCTTTAGGG CCTCTGTTTC ATGACTTTTT CTCTCATCTG AGTCTTCCTT CTCCAATCCA CAAGTATCAA CCAAACCTTG CAGAGAAGCT AGAGCTTCCT TGCTTTCAAT GAGTGACTCC TGAAGTAAGT CTCTCTCTCT TGCCACAGAT AGAAGCTCGC TAGCCAACGA GTCAGACTCA TTCGCCAGAG AGCGATATCG GGAGAGGTCC GCCAGAGCTG TACGCTTTTC GTCGGACAAA CCAGTTA
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Protein sequence | MSALPPNLDF AATEVEICAK WKQESTFQTQ DKLSLDRGDE EFTFYDGPPF ATGLPHYGHI LAGTIKDTVT RYAAMSGKHV SRRAGWDCHG LPVEYEIDQK LNITHRDQVL EMGIDKYNAT CRSIVTRYTA EWESTVTRLG RWIDFENDYK TMDPSFMESV WWVFRQLFDK NLVYQGYKVM PYSTACTTPL SNFEAGLNYK DVKDPAVVVS FPILGEPQEV SFVAWTTTPW TLPSNLALCV NPAMEYVQIL DKATNHSFIL AKSRLAQLYP IMNNKKKWKP EKAAELYELQ ATMPGTALVG KRYQPLFDFF QGEPGSENYW QVVSDSYVTD DAGTGVVHQA PAFGEDDYRV CLAHGIIAKG GEVPCPVDAD GNFVDLIAPV KGMHVKAADE ILIQLVKDSG RLVQKDVLLH SYPFCWRSDT PLIYKAVPSW FVKVEEIRDR IVENNKQTHW VPKEVKEGRF HNWLSDARDW AVSRNRFWGT PIPIWANDDL SEVVCIGSVD ELAELSGVRV EDLHRETVDQ ITIPSQKTPG GVLRRVDEVF DCWFESGSMP YAQSHYPFEN KEGWEKGFPA DFIAEGLDQT RGWFYTLMVL STALFDKPAF KNNIVNGMVL ASDGQKMSKR KKNYPDPNIV ISKYGADALR MYLVNSPVVR AESLKFKEEG VLGVVKEVFL PLYNAFRFFL QNIERWELEG SSKFVPDLDK VRQTANPTDI WIQAETQGLI KFVHEEMGAY RLYTVMPALV SFGTQLTNWY VRLNRDRLKG AEGEGQEADI EAETGLQVLY DVLLNVSMIM APFTPFITEF FYQHLRKFQP SYLDATNGGG TSNPPMPGKS DSVHFLRLPT YDETRLNKQV VEAMEALQSV VEQGRNAREK RNINLRTPIK TIVAILRNPA DYVVAGITGP LKRYILSELN VWDFKVVPAE EEHDWVTLAL TPDFKVLGKK LGSKMKAVSA AVKGLSHEQA VKCLEDGKLE IERVALDTAT ELVSKLTFSR EGEHWEATEK PDGSLVVAID CTQDEAILSA GRSRELMNAI QQLRKNAGLD LKDVVETFFR EEEGVTLVEE TVARNVPLFE AKFKGAVPLP YRFVPKWAVV LKNETVDVGG TKVDVFIFRP AVAVKESLGP SVESVLSTLE PSSLPKGGKF SFSLDGVSTT LTEGTDFWLS TTDKVRYTKV LAWLKVS
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