Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27719 |
Symbol | |
ID | 7201186 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 643545 |
End bp | 645208 |
Gene Length | 1664 bp |
Protein Length | 506 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180680 |
Protein GI | 219119858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.113003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCTGCCCTAC CAACACCTTG GTTCTGACGA CAACTACATA AAACTGGTTC CTCACAGTCA GCATGACCGC CACCACCGTA GCTTCGTCGT CTCAGTATTT GGCATTGGCC GAAAAGGCTC GGGCTTTCCT TTCGGCATCG ACTGATCCGT TTCACGCCGT CGCCAACGCA GTGGCCAAAC TTGAATCCGC CGGGTTTCAA AAGGTTCGTT ACGGCAGGAA CGCGCTCGCC TCGAACACCG ACAACAGACC GAAATTTGCT CCTGGTGGAA AGTACTACTA TACCGTACAC CATTCAACGC TTGTAGCCTT CACCATTGGA CAGCAGTATA CTCAAGGTAC CGGTGCTAGA CAAGCTCATC CCGCCTTTCA CGTGATCGGG GGACACACTG ACTCGCCCAA CCTCAAAGTT AAACCACGAT CGCAAAAACC GTCTAAAGGT ACCACGTCCG TCGTCCAGCT TGGTGTCGAA TGCTACGGCG GTGGTTTGTG GCATACCTGG TTTGACCGAG ATCTGAGTAT TTCGGGAAAG GTCTTGGTGC GAGAAACGGC TACCGCAGCA TCCAACGGAG CAGGACAAGG ATCCGTTGTT CAACCGACAT TAGTCAAGTT GGAGGATCCG ATAGCACGAG TCTCAACCCT CTGTATACAC TTACAATCCG CCGAAGAACG TCGAGCTTTT GCGGTCAACA AGGAAGAGCA TACATCGCCC ACTATTGCGA GCACCGTCCA AAACATGATG GAACCAAACG AGCAACTGGA ACAAGGTGCT GCCGTTCAAC TCAACGGTTC TACAGGGACT GATTCTTGGC AAAAAGGACA AGAACCGTTG TTGCTACAAC GTATTGCCAA GGAGCTCAAC ATTGAAGTCA GTCAGATTGC GGATTGGGAA CTTAGCCTCT ACGATACTCA ACCTGCCGCA ATCGGGGGTA TGCACGGAGA ATTTCTCTAC AGTGCGCGAC TGGACAATCT TGCTACCGTC TTTTGCGCAG TGGAAGCATT GACTTCTCAT AGTCTGGACT TGTCGACCAG CCAAGATGTA GACATGATTG TGTGCTTTGA TCATGAAGAA GTCGGGAGCG TTTCATCGCA TGGTGCCGGT TCTCCGGTCA TGTTGGAAGC TATGGACCGC GTTCGTGATG GTCTTGGCAT ATCACCAGAC CCTGCTCTCC ATGCTACATC CATTGCCAGC TCGTTCTGTC TTTCTATTGA CCAGGCACAC GCAATTCATC CCAATTATGC ATCGAAACAC GAAGCCCAAC ACGCGCCTGT GTTGAATGGG GGGGTGGTCA TCAAGACCAA TTCCAACCAG CGATACGCTA CCAACGGTAC CACCTCCTTT TTATTACGGG AATTGGCAAA ATCTTGCGAC GTGCCCATTC AAGAATTTGC CGGTAAGTGC AACGTACGAG AAACGAAGGA GACGCTTGTT TACCACGATT TCTAACTTTC CCATTCAAAT ACCTCTTGTC ATGTAGTGCG GAACGATTGT CCATGTGGCA GCACAATTGG ACCAACCATT TCAGCGCTGA CTGGATTGCG CGTGGTGGAC GCCGGGATGC CTCAGCTTTC CATGCACAGT TGTCGCGAAA TGATGGGTAC GAAGGATTTG ACGCATGGAG TAAATCTGTT TCGGGCATTT TTCGGTAACT TTCGCAAAAT CGAT
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Protein sequence | MTATTVASSS QYLALAEKAR AFLSASTDPF HAVANAVAKL ESAGFQKVRY GRNALASNTD NRPKFAPGGK YYYTVHHSTL VAFTIGQQYT QGTGARQAHP AFHVIGGHTD SPNLKVKPRS QKPSKGTTSV VQLGVECYGG GLWHTWFDRD LSISGKVLVR ETATAASNGA GQGSVVQPTL VKLEDPIARV STLCIHLQSA EERRAFAVNK EEHTSPTIAS TVQNMMEPNE QLEQGAAVQL NGSTGTDSWQ KGQEPLLLQR IAKELNIEVS QIADWELSLY DTQPAAIGGM HGEFLYSARL DNLATVFCAV EALTSHSLDL STSQDVDMIV CFDHEEVGSV SSHGAGSPVM LEAMDRVRDG LGISPDPALH ATSIASSFCL SIDQAHAIHP NYASKHEAQH APVLNGGVVI KTNSNQRYAT NGTTSFLLRE LAKSCDVPIQ EFAVRNDCPC GSTIGPTISA LTGLRVVDAG MPQLSMHSCR EMMGTKDLTH GVNLFRAFFG NFRKID
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