Gene PHATRDRAFT_27135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27135 
Symbol 
ID7200733 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp503808 
End bp505386 
Gene Length1579 bp 
Protein Length98 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179660 
Protein GI219117741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGAAAAACA GTTGACAAGG TTTCGAGCTT TGCCAACGAC TTACGTTACG ACAACGTTTA 
AAAAAGGAAA GCAGTGGTCT CCAGACAGCT TGAGGGCGAA TTCTTTTTAA AGGCTGTAGG
GAGGCAAAGA AAGAATGACT GCCATGAACG GCTCCGAGAT GAAAGTAAGC GAACACGAGG
TGAGGCTATC CCGTACCCAC GTCCGTAAAT TATTCCTTCG TATACCCCGC GGGTTCTCAC
AGAAGTGGGA ATTCTATTCA GAAAAGGGTG GATGAAGAAG TCAAGCAACT CTTGCTGGAC
ATCCGAAGAA TTGGAAATGT ACCTGGATCG CCACAGGTGA AGTTTGGAGA ACTGTTTGAC
GACGACAACG TACAACAGTT CTACGAAGCC TTAGTAGGAA CTCTTAAATC GGCGAAAAGA
CGCGGTGTGA TCGATTTCAA GGGTCAGATG CTTCTGAAAG GCATGCACGA CAGTGTGATT
ATCTCCATTA CAGAGCAAGG TCAGAAAGTT TAGCAGGCTT TCAAATAGTA CTTCCGGTCT
TCACTAATGG TTTTGCTTTA TCCGTGTACA ACAGATACCG TACCCACTTT GGCCTGAAGC
ATATTTGCTA TACATTTTAC GTTCATAATT TCTACTGACA GTAAGTTTTT GATTTTCAAT
GCTGTATGCT GTTTGTACGA GGCAACCGGC AGTTTAAAAT GAGCATGCAG ATATGCTATA
AGAAACGATT GTGTTTATTT CGACTTGACA GTTGGTATTG CAGGCTGTGA ACCATCCACA
GAAATTATTC CGCCGGATTC GTGGACTTTG TCAATCAGAA AGTCGACGGT TTTGTCCTTG
TCAAGACCGG CCTTCGTTTT TCCGTGTTTC CAGCGGTCGT CTGTGTTGTC ATATTCGAAA
CCCGATGAGC GCAAGTGCTC TTCAGAGATA CTAGCATTGA AATAGTGGTG AACAACCAAC
GAGACGTGGG AATGGAATGA CTCAGTCACA ACACCGCTGA GTTTCCCACC TTTGGCTGGA
CAAAATATAA GGGCATCGCA TTGCACAGTA TAATGAATAT AAGGCAATTC GTTCAAAATC
TCTCCCCTGC CTCCCTTTGC AATTTTCAAA TTATTGAACG CCAAAAGAAT ACCACCCATG
CCATCCGTGA ACTTTAAAAG AAACAGCCTC AAATTTTCTT CAATACTTTT TCGTACGTTG
TGGAGACCAG CTGGAAGGAT AGAAACGATG AGCTCTAGCT TCTTTTCCAA AAAAACAGGC
ACGACAACCA CCGGCAAACC ATTTTCTTTG CGACGCATTT TCGACTCTTT CTTTGCTTTT
CTTGCTCTCT CCACTCCCTC GGAAAAGTCC TCCGTGCGCT CTCTCTTTCC CATCTTGGCT
GGTCAATAAG AGCGAAGAAA GTAGGGAGAT ATGTATGCAG GACGACGAGC GATAAACTAC
GAGAGCAGCA GACGCTTTGA GCTATGTGAC TTCCCCCTCG GCTTGTGATT ATTGCATACG
CCGCAAAAGC AGGATGACTT CACGGTTATC ACAGTTCCAA AGTCGAAATA TGTTCGGCGG
GCTGTCTTCC CATTGTCAA
 
Protein sequence
MTAMNGSEMK VSEHEKRVDE EVKQLLLDIR RIGNVPGSPQ VKFGELFDDD NVQQFYEALV 
GTLKSAKRRG VIDFKGQMLL KGMHDSVIIS ITEQGQKV