Gene PHATRDRAFT_27082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27082 
Symbol 
ID7200714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand+ 
Start bp369988 
End bp370739 
Gene Length752 bp 
Protein Length133 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179630 
Protein GI219117679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.163834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTCTGGCAA AAAATGTTAT CTTGAATTCC TAGTTCTGCA TTCTACGTGC GCACCCGCTG 
ATTTCAGGAG CGGGATGGAG AAATTGGCAG TGGCGCAGAC GGAATACCCA ACTCATTGGC 
ACCATTCGGG GTAACAGCGG TAAAGACAAC CGTGCAAACC GACCGAAACC TAGCTGCAAG 
GCCACAATAT TCGCGAAAGT AGAAGTTTTG TCGCTTTCAT TGACTGAATA TACTCTATCT 
CTTTCCATTC ACAGTCAATG AGCTACGATG AGGATGAGCG AGGCGAAGAG GATGTGCCCG 
CGCAAGTTGC CGAATTGGCG AACGCGAGTG TTCCGACCAA TCTGAAAGCG GTCCGGGCTT 
GCAAACGTTG CGGTATCCTC AAAACTCCGG AGCAGTTTTT GGACGATGGG TGCGAGAACT 
GTCCATTCTT GCACATGGCG GATGATATGC AACAAGTGAA CAAGTGCACG ACGGCGTTTT 
ACGAAGGACA GGCGGCAGTG ATGGACCCAC GTGATAGCTG GGCCGCCAAA TGGATACGCG 
TGGACGCCTA TCTTCCCGGT GTTTATGCGA TCACCGTTAC CGGGAATTTT GATCGCGATA 
TCGAGGAAGA CTTGGAAAAC AGAGGGATAA GATGGCGGTG TCGACCGCCT CAAAACTAAA 
CAAGCTATGT CCAATTCTTC TTTTCTTGGA CAGTGAAAAA GACGCCTTTA AACTAGACTA 
GCAATAAGTA GATGCTTTGC TCTTTGTGTG CT
 
Protein sequence
MSYDEDERGE EDVPAQVAEL ANASVPTNLK AVRACKRCGI LKTPEQFLDD GCENCPFLHM 
ADDMQQVNKC TTAFYEGQAA VMDPRDSWAA KWIRVDAYLP GVYAITVTGN FDRDIEEDLE 
NRGIRWRCRP PQN