Gene PHATRDRAFT_26515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_26515 
Symbol 
ID7199571 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp462137 
End bp463347 
Gene Length1211 bp 
Protein Length272 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178780 
Protein GI219115970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACTTTCCTGT TGACCATGGC TTTTCAACTA AAGACTGTCG TAAGTTCCCA ATAGGCGTAA 
GAGCTTGTTG TGCAATGAAA AGAAATGAAA ATTTGGTTCG AATAGGAATT GCTTTGAAAC
TTGCAAGCGG TGAATACGCT TGGATAGGGG TTTACCTTCT TTCACATTTC GTTTTCCTTG
AGATGAATTC CAAATTCCGA CTAAGTTGTG ATGCAGAGCT TAGTATTTCC GATGAGCCAA
GGAATTTTAT GTGTCGATCT TCGCGTTATT CAAAAGCCGC CGACTCATAC ATTCGCATTT
TTGTTCATGT TGCAGTTTCA GAGCCGTCAA GCCTTGGCTA TAGGTGCTGC GGCAATCGCA
GCTGTTCCAG CAATTACTCT TTTGTCTGAT GATGTAGCCC ATCCACCGGC TTTCCCTTGG
CGCCACCGTG GATTCTTCTC GTCTTACGAT TGTGGTGCTC TTCGCCGAGG TTTCCAAGTT
TACCGGCAGG TCTGCGCTTC ATGCCATTCA GTCGAGCGTA TTCGCTGGCG TGAACTTGTC
GGCGTGACTC ATACCAAAGA GGAAGTTCAG CAGTTGTGTA AGGAAGTTGA TGTCTTAGAT
GGACCCAACG ATGAAGGTGA AATGTTCGAG CGTCCCGCGA AGTTGTTCGA TGTCCTGCCC
AAGCCGTACT TGAATGAAGA GCAAGGGCGT TCCGCCAACG GTGGCGCTTA TCCACCAGAC
CTCTCCTTGA TGGTGAAGGC GCGACATGAA GGACACGACT ACATTATGTC GCTATTGACT
GGATACATGG AACCCCCGGC GGGCAAGGTA ATGATGGAAG GGCTCTATTA CAATCCATAC
TTTCCGGGTG GTGGGATTTC CATGCCCCCT CCGTTGCAGG ATGAGGGCGT AGAGTACCCT
GACGGTACAG TGGCAACTAT TTCCCAGCAA GCCCGTGACG TTGCTCAATT CTTGAACTGG
ACCGCCGAAC CCGAAATGGA ACAGCGCAAG AAAAACGCTG GTCTCAACAT GCTCGCCCTC
ATTTTTATGA CACTCGGTGC GGGGTATATG AAGCGTTGGC GATGGTCGCC GCTCAAGACA
CGAAAGATTG CGTATGTGAA GGATATGTAA ACGGAACCAT TGCATGTTCT GATGCGCAAA
CTGAGAAAAC GGGTATGAAC AACGTCCACT CATTAAAATT TTAAGACAGT GTGTTGAAAG
TTTACTGCGC C
 
Protein sequence
MAFQLKTVFQ SRQALAIGAA AIAAVPAITL LSDDVAHPPA FPWRHRGFFS SYDCGALRRG 
FQVYRQVCAS CHSVERIRWR ELVGVTHTKE EVQQLCKEVD VLDGPNDEGE MFERPAKLFD
VLPKPYLNEE QGRSANGGAY PPDLSLMVKA RHEGHDYIMS LLTGYMEPPA GKVMMEGLYY
NPYFPGGGIS MPPPLQDEGV EYPDGTVATI SQQARDVAQF LNWTAEPEME QRKKNAGLNM
LALIFMTLGA GYMKRWRWSP LKTRKIAYVK DM